Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1045 ATGGACCAATCAACGAGTGTTCCTTCTTCTTCTTCTTCTTCAGCACAATCGTGTTCTTCTTCTTCTTCTTCTTCTTCTCGGCACTTGGAGCGCATGATAAACTCGAAGCAGTACAAGTCCCCTTCGAGAACAATCTGCTCCGACAGGTTCATTCCATGCAGATCTGCCTCCAAATTCTCCCTCTTCGACATCCCCTCCTCCGCCTCCGCCGACAACACTCCCACCCCTTACGCCTCCCTCCTCCGCACAGCGCTCTTCGGCCCCGACGCTCCCCTCACGCCGGAGAAAACCAATCCCAATATTTTCCGTTTCAAGACGGAGACTCGCCAGTCCATGCACTCTCTCTCCCCCTTCCTCCTCGACCACGACGTCGTTTCTGGCGTCAATCATACGCCGCCGGTTAAGCCTCCCAGGAAGATTCCGCGATCGCCGTTTAAGGTTCTGGATGCACCTGCGCTTCAAGATGATTTTTATCTGAACCTTGTGGATTGGTCGCCGCTCAATGTATTGGCTGTGGGTCTCGGTAACTGTGTTTATTTGTGGAATGCTTGTAGCAGCAAGGTAACTAAATTATGCGACTTGGGGACTGATGACTGTGTTTGTTCGGTTGGTTGGGCTCAGCGTGGTGCACTTCTTGCTGTTGGAACTAGCAGTGGTCAAGTCCAGATTTGGGATGCATCTCGATGCAAGGCGATAAGAACTATGGAGGGTCATCGTTTACGAGTTGGGGCTTTGGCCTGGAGTTCATCTATTTTATCTTCTGGTAGCCGGGATAAAAATATTTATCATCGAGATATACGTGCACAGGATGATTTTGTCAGTAAACTGTCAGGGCACAAGTCAGAGGTTTGTGGACTGAGGTGGTCTTATGATAACCGGGAGTTGGCTTCTGGAGGAAATGACAACAGATTGCTTGTTTGGAATCAACAGTCAACCCAGCCAGTCCTGAAGTTCTGTGAGCATACAGCAGCTGTTAAAGCTATTGCATGGTCTCCTCATGTTCATGGACTTCTTGCATCTGGGGGAGGAACTGCAGATCGATGTATTCGTTTCTGGAATACAACCACAAACTCACACTTAAGCTGTATGGACACTGGAAGTCAGGTTTGCAATCTCGCCTGGTCTAAAAATGTCAACGAACTGGTAAGCACACATGGCTACTCCCAGAACCAGATAATAGTCTGGAGATATCCCACCATGTCTAAGATGGCGACTCTTACTGGCCATACTTTTAGAGTTCTTTATCTTGCCATCTCTCCAGATGGGCAGACCATTGTCACTGGAGCTGGAGATGAAACGCTTAGGTTTTGGAATGTATTCCCTTCCCCAAAATCACAGAATACTGAGAGTGACATTGGAGCATCATCTCTCGGAAGAACAATTATTAGGTGA 1392 0.4835 MDQSTSVPSSSSSSAQSCSSSSSSSSRHLERMINSKQYKSPSRTICSDRFIPCRSASKFSLFDIPSSASADNTPTPYASLLRTALFGPDAPLTPEKTNPNIFRFKTETRQSMHSLSPFLLDHDVVSGVNHTPPVKPPRKIPRSPFKVLDAPALQDDFYLNLVDWSPLNVLAVGLGNCVYLWNACSSKVTKLCDLGTDDCVCSVGWAQRGALLAVGTSSGQVQIWDASRCKAIRTMEGHRLRVGALAWSSSILSSGSRDKNIYHRDIRAQDDFVSKLSGHKSEVCGLRWSYDNRELASGGNDNRLLVWNQQSTQPVLKFCEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLAWSKNVNELVSTHGYSQNQIIVWRYPTMSKMATLTGHTFRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQNTESDIGASSLGRTIIR* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1045 463 MobiDBLite consensus disorder prediction 1 40 - -
Dod02g1045 463 PANTHER PROTEIN FIZZY-RELATED 1 23 463 - -
Dod02g1045 463 ProSiteProfiles Trp-Asp (WD) repeats profile. 276 317 IPR001680 GO:0005515
Dod02g1045 463 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 406 439 - -
Dod02g1045 463 SUPERFAMILY WD40 repeat-like 156 444 IPR036322 GO:0005515
Dod02g1045 463 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 276 308 - -
Dod02g1045 463 Gene3D - 134 443 IPR015943 GO:0005515
Dod02g1045 463 ProSiteProfiles Trp-Asp (WD) repeats profile. 406 439 IPR001680 GO:0005515
Dod02g1045 463 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 23 463 IPR033010 GO:0010997|GO:0097027|GO:1904668
Dod02g1045 463 ProSitePatterns Trp-Asp (WD) repeats signature. 425 439 IPR019775 -
Dod02g1045 463 SMART WD40_4 269 308 IPR001680 GO:0005515
Dod02g1045 463 SMART WD40_4 399 438 IPR001680 GO:0005515
Dod02g1045 463 SMART WD40_4 311 353 IPR001680 GO:0005515
Dod02g1045 463 SMART WD40_4 185 225 IPR001680 GO:0005515
Dod02g1045 463 SMART WD40_4 355 396 IPR001680 GO:0005515
Dod02g1045 463 SMART WD40_4 228 265 IPR001680 GO:0005515
Dod02g1045 463 SMART WD40_4 141 182 IPR001680 GO:0005515
Dod02g1045 463 Pfam WD domain, G-beta repeat 273 308 IPR001680 GO:0005515
Dod02g1045 463 Pfam WD domain, G-beta repeat 313 353 IPR001680 GO:0005515
Dod02g1045 463 Pfam WD domain, G-beta repeat 402 438 IPR001680 GO:0005515
Dod02g1045 463 Pfam Anaphase-promoting complex subunit 4 WD40 domain 190 249 IPR024977 -
Dod02g1045 463 ProSiteProfiles Trp-Asp (WD) repeats profile. 200 234 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1045 Dod-Chr2 13072523 13079395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1045 293 439 Miscellaneous Gene Families AT5G08390 21.769 8.10e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1045 K03364 - gmx:100780928 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1045 02 13072523 13079395 Dod02g1045 02 13072523 13079395 ECH
Dod05g1462 05 39232162 39240113 Dod02g1045 02 13072523 13079395 PCT