Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1376 ATGGCCTCTGCTACTCCCCTGTTTCTGCCCCTGTTGCTGCTGCTGATCAGCATTCCCCATTCATCATCATCATCATCACCATCATCACAATCACAATCACAAATGCTTCTCCTTACTCTAACCCATTCCCTCTCCCAGTCCCAATCCAACTCCACCACCATCCAACACCACCTCCTCAAAACAACCGCCACCCGCTCCGCCACCCGCTTCCGTCACCACCACCACCACCACAACCACTACCGCCCTCAGCTCTCCCTCCCACTCTCCCCAGGCAGCGACTACACCCTCTCATTCACCCTCGGATCGCACACCCTAACACTCTACATGGACACGGGCAGTGACCTCGTCTGGTTCCCCTGCTCCCCCTTCGCCTGCATCCTCTGCGACCTCAACCCCACCAGCACCACCACAAACACCCCGCCACCCATTCTCTCCCTCCACCAAAACGACGCCGTCCCATGCCACTCCCCATCCTGCTCCGCGGCACACAGTCCCACCACCTCCTCCGACCTCTGCGCCATGGCTCGTTGCCCCTTAGACCGCATCGAAACCTCCGACTGCTCCTCATTCCGGTGCCCTCCCTTCTATTACGCCTACGGCGACGGAAGCCTAATCGCCACCCTCTACACACACACAATCTCTTTATCATCTTCTCTTCTCCTCAGAAACTTCACCTTCGGCTGCGCCCACACCACTCTCAACGAACCCGTCGGCGTCGCAGGCTTCGGCCGCGGCTTACTCTCTCTCCCAGCACAGATAGCCACCTTCGCTCCTCAACTCGGAAACCGGTTCTCTTACTGTTTGGTCTCTCACTCGTTCGACTCGGAGCTAGTTCGGCGGCCGAGTCCACTCATTCTCGGCCGTTACGACGACAAACAGAAGAATAATAATAGTAACGGTGCTGAAGAGTTTGTGTACACGCCGATGCTTGAGAACCATCGGCATCCGTATTTTTATTGTGTGGGGCTCGTCGGGATTTCGGTGGGGAAGAGGATGATTCCGGCGCCGGAGATGCTGCGGAGGGTTGACGTGAAGGGGAACGGCGGCGTTGTGGTGGATTCCGGCACCACGTTCACGATGCTGCCGGCGGGTTTCTACGACTCGGTGGTGGCTGAGTTCGACCGCCGAGTAGGGCGAGTCAGGGAGAGAGCGAGTCGGGTCGAGAGGAATACCGGGCTGCGGCCGTGTTATTATTTCGGCGGAGCGGCAGCGGCGGGGGGAGTGCCGGCACTGACGTTGCATTTCGCGGGCGGGAATTATTCCAGTGTGGTGCTGCCAAGGAAGAATTATTTTTACGAGTTTTTGGACGGTGGTGATGAAGGGGTGGGAGGGAAGAGGACGGTTGGGTGCTTGATGCTGATGAACGGTGGAGATGATGCAGAGTTGAGTGGTGGGCCCGGGGCCACGCTCGGGAACTACCAGCAGCAAGGGTTTGAAGTCGTGTATGATCTGGAGAAGAAGCGCGTGGGTTTCGCCAGGAGGCAGTGCGCGTCGCTTTGGGATAGGCTTAGCCGCGAGAACAACTAG 1527 0.5822 MASATPLFLPLLLLLISIPHSSSSSSPSSQSQSQMLLLTLTHSLSQSQSNSTTIQHHLLKTTATRSATRFRHHHHHHNHYRPQLSLPLSPGSDYTLSFTLGSHTLTLYMDTGSDLVWFPCSPFACILCDLNPTSTTTNTPPPILSLHQNDAVPCHSPSCSAAHSPTTSSDLCAMARCPLDRIETSDCSSFRCPPFYYAYGDGSLIATLYTHTISLSSSLLLRNFTFGCAHTTLNEPVGVAGFGRGLLSLPAQIATFAPQLGNRFSYCLVSHSFDSELVRRPSPLILGRYDDKQKNNNSNGAEEFVYTPMLENHRHPYFYCVGLVGISVGKRMIPAPEMLRRVDVKGNGGVVVDSGTTFTMLPAGFYDSVVAEFDRRVGRVRERASRVERNTGLRPCYYFGGAAAAGGVPALTLHFAGGNYSSVVLPRKNYFYEFLDGGDEGVGGKRTVGCLMLMNGGDDAELSGGPGATLGNYQQQGFEVVYDLEKKRVGFARRQCASLWDRLSRENN* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1376 508 Pfam Xylanase inhibitor N-terminal 94 272 IPR032861 -
Dod05g1376 508 PANTHER OS07G0603500 PROTEIN-RELATED 12 501 - -
Dod05g1376 508 SUPERFAMILY Acid proteases 89 501 IPR021109 -
Dod05g1376 508 Gene3D Acid Proteases 292 500 IPR021109 -
Dod05g1376 508 Pfam Xylanase inhibitor C-terminal 319 492 IPR032799 -
Dod05g1376 508 ProSiteProfiles Peptidase family A1 domain profile. 94 492 IPR033121 -
Dod05g1376 508 PANTHER BNAA01G17170D PROTEIN 12 501 - -
Dod05g1376 508 Gene3D Acid Proteases 87 287 IPR021109 -
Dod05g1376 508 CDD pepsin_A_like_plant 94 496 IPR034161 -
Dod05g1376 508 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 350 361 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1376 Dod-Chr5 37874821 37876924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1376 94 499 Miscellaneous Gene Families AT1G44130 22.042 6.65e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1376 - - gmx:100805699 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0981 02 12411182 12413113 Dod05g1376 05 37874821 37876924 PCT