Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0981 ATGGCTTCACACTTGTTAATGCTTCTCTTATTCACACACTCGCTCCTCCTTTCAGTTTCATCATCACAAACACAAACACTAGTATTGCCCTTAACACACTCAGTCTCCAAAGCCCGATTCAACAGTACCCACAACCTCCTCAAATTCACATCCACCCGCTCCGCAGCACGCTTCCAACGCCACCGCCACCGCCACCGCCAACGTCAAGTGTCCCTCCCACTCTCCCCTGGAAGTGACTACACCCTATCCTTTACCCTCGGCTCCAACCCGGCCCAGCCCATAACCCTCTACATGGACACAGGCAGCGACCTCGTCTGGTTCCCCTGCGCCCCCTTCGAGTGCATACTCTGCGAGGGCAAGCCCAGGCCCGGCCCAACCAAACCCCCAAACATCACCACCCGGGCCCAGTCCGTCTCATGCCAATCCCCTGCATGCTCCGCGGCCCACTCCTCCACGTCATCCTCGGACCTCTGCGCAACCGCTCGTTGCCCGTTGGACTCAATCGAAACCTCCGATTGCAACAATTTCCAGTGTCCGCCATTCTACTACGCTTACGGTGACGGAAGCTTAATCGCGAAGCTCTATAGCCACACACTCTCTATGTCTTCCCTTGTTCTCAAGAACTTCACCTTCGGTTGCGCCCACACCACCCTTGGCGAGCCCACCGGCGTCGCAGGGTTCGGCCTCGGCTTGCTCTCTTTCCCGGCGCAGGTTGCCGCCGTCTCTCCCCAACTCGGTAACCGATTCTCTTACTGCTTGGTTTCTCACTCTTTCGACGGTGAACGAGTTCGTCGACCGAGTCCACTCATTCTCGGCCGTTATGGCGGTGAAACTGGTGAGTTTGTGTACACTTCAATGCTTCGGAACCCGAAGCACCCTTACTTCTACTCCGTGGGCCTCGCCGGAATCTCCGTCGGGAATAGGGATTTTCCGGCGCCGGATATGCTGAAGAGGGTGGACTCGGCGGGGAGCGGCGGCGTTGTCGTTGATTCCGGGACGACGTTCACGATGTTGCCGGCGAGTTTGTATAAGTCGGTGGTGGCCGAGTTCGACCGGCGAGTCGGGCGAGTTCACGAGCGGGCTGGTGAGGTTGAGGGTAAAACGGGCCTGGGCCCATGTTATTACTTAGACGGTGTGGTGGCGGCCCAAGTGCCGGCTGTGGCGTTGCATTTTGTGGGGAATGGTTCGAGTGTGGTGCTGCCTAGGAGGAACTACTTCTACGAGTTTTTGGACGGTGGTGATGGAGCAGCAGGGATGAAGAGGAGGAAAGTTGGGTGCATGATGCTGATGAACGGTGGTGATGAAGCTGAGTTGAGCGGTGGGCCCGGGGCCACTCTTGGGAATTACCAACAGCAGGGTTTTGAGGTTGTTTATGACCTGGAAAAGCGGCGCGTGGGGTTCGCTAGGAGGCAGTGCGCGTTGCTTTGGGATAGCCTCAACCGTGATAAGCACTAG 1455 0.5746 MASHLLMLLLFTHSLLLSVSSSQTQTLVLPLTHSVSKARFNSTHNLLKFTSTRSAARFQRHRHRHRQRQVSLPLSPGSDYTLSFTLGSNPAQPITLYMDTGSDLVWFPCAPFECILCEGKPRPGPTKPPNITTRAQSVSCQSPACSAAHSSTSSSDLCATARCPLDSIETSDCNNFQCPPFYYAYGDGSLIAKLYSHTLSMSSLVLKNFTFGCAHTTLGEPTGVAGFGLGLLSFPAQVAAVSPQLGNRFSYCLVSHSFDGERVRRPSPLILGRYGGETGEFVYTSMLRNPKHPYFYSVGLAGISVGNRDFPAPDMLKRVDSAGSGGVVVDSGTTFTMLPASLYKSVVAEFDRRVGRVHERAGEVEGKTGLGPCYYLDGVVAAQVPAVALHFVGNGSSVVLPRRNYFYEFLDGGDGAAGMKRRKVGCMMLMNGGDEAELSGGPGATLGNYQQQGFEVVYDLEKRRVGFARRQCALLWDSLNRDKH* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0981 484 Gene3D Acid Proteases 274 476 IPR021109 -
Dod02g0981 484 Gene3D Acid Proteases 58 262 IPR021109 -
Dod02g0981 484 ProSiteProfiles Peptidase family A1 domain profile. 80 468 IPR033121 -
Dod02g0981 484 CDD pepsin_A_like_plant 80 472 IPR034161 -
Dod02g0981 484 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 327 338 IPR001969 GO:0004190|GO:0006508
Dod02g0981 484 Pfam Xylanase inhibitor N-terminal 80 256 IPR032861 -
Dod02g0981 484 Pfam Xylanase inhibitor C-terminal 296 468 IPR032799 -
Dod02g0981 484 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 7 481 - -
Dod02g0981 484 PANTHER ASPARTYL PROTEASES 7 481 IPR001461 GO:0004190|GO:0006508
Dod02g0981 484 SUPERFAMILY Acid proteases 75 477 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0981 Dod-Chr2 12411182 12413113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0981 38 475 Miscellaneous Gene Families AT1G77480 23.974 2.43e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0981 - - adu:107488223 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0981 02 12411182 12413113 Dod02g0981 02 12411182 12413113 ECH
Dod02g0981 02 12411182 12413113 Dod05g1376 05 37874821 37876924 PCT