Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1299 ATGTACAGAGGAGAGCGAGGAGGTGTTACGGCGGCGGCGGCGGCGGCGGCAGCGGCAGTTGGGTCCTCGAAATCGGACAATCGTAAGCGAATCAACGACGTGCTCGATAAGCAGCTCGAGCGATCCTCACCGTCCACTTCAAAGGCCATCAACGGCAAGGGCAGGTCCTCCCTCCTCTCCTCCACCTCCAAGGACCCTCGCTCTACAATCTCTCTCTCCAAAAACGCCAACGTCTCAGAGGAACCTGAAACAGACAGTGAAGAGTCAGATGTTAGTGGTTCTGATGGAGATGATACATCTTGGATCTCATGGTTCTGCAATCTGAGAGGAAATGAATTCTTTTGCGAGGTAGATGAGGATTACATCCAAGATGACTTCAACCTCTGTGGACTAAGCAGTCAAGTGCCTTACTATGATTATGCTCTTGACTTAATCTTGGATGTTGAATCCTCCCATGGTGACATGTTCACAGAGGAACAAAATGAGCTAATTGAATCAGCAGCGGAGATGCTATATGGTCTGATTCATGCTCGATATATATTGACAAGCAAAGGAATGGCTGGCATGCTTGACAAGTATAAGAACTATGATTTTGGTCGATGCCCAAGAGTTTACTGCTCTGGGCAACCTTGCCTTCCAGTTGGTCAGTCAGACATTCCTAGGTCGAGTACCGTGAAGATCTACTGCCCTAGGTGTGAAGATCTTTACTATCCTCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACCACATTTCCACACCTCTTCCTGATGACATATGGACAACTGAAGCCACCGAAACCATCCCAGAGCTATGTTCCAAAAGTTTTTGGGTTCAAAATTCACAAGCCATGA 864 0.4757 MYRGERGGVTAAAAAAAAAVGSSKSDNRKRINDVLDKQLERSSPSTSKAINGKGRSSLLSSTSKDPRSTISLSKNANVSEEPETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDEDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGLIHARYILTSKGMAGMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPPKPSQSYVPKVFGFKIHKP* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1299 287 Gene3D - 198 272 - -
Dod05g1299 287 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 93 197 IPR016149 GO:0005956|GO:0019887
Dod05g1299 287 PANTHER CASEIN KINASE II SUBUNIT BETA 18 286 IPR000704 GO:0005956|GO:0019887
Dod05g1299 287 SMART CK_II_beta_2 100 283 IPR000704 GO:0005956|GO:0019887
Dod05g1299 287 MobiDBLite consensus disorder prediction 35 96 - -
Dod05g1299 287 SUPERFAMILY Casein kinase II beta subunit 98 286 IPR035991 GO:0005956|GO:0019887
Dod05g1299 287 ProSitePatterns Casein kinase II regulatory subunit signature. 201 232 IPR000704 GO:0005956|GO:0019887
Dod05g1299 287 Pfam Casein kinase II regulatory subunit 100 283 IPR000704 GO:0005956|GO:0019887
Dod05g1299 287 PRINTS Casein kinase II regulatory subunit family signature 117 131 IPR000704 GO:0005956|GO:0019887
Dod05g1299 287 PRINTS Casein kinase II regulatory subunit family signature 172 193 IPR000704 GO:0005956|GO:0019887
Dod05g1299 287 PRINTS Casein kinase II regulatory subunit family signature 247 264 IPR000704 GO:0005956|GO:0019887
Dod05g1299 287 PRINTS Casein kinase II regulatory subunit family signature 100 116 IPR000704 GO:0005956|GO:0019887
Dod05g1299 287 PRINTS Casein kinase II regulatory subunit family signature 219 240 IPR000704 GO:0005956|GO:0019887
Dod05g1299 287 PRINTS Casein kinase II regulatory subunit family signature 197 218 IPR000704 GO:0005956|GO:0019887
Dod05g1299 287 PANTHER CASEIN KINASE II SUBUNIT BETA-2 18 286 - -
Dod05g1299 287 MobiDBLite consensus disorder prediction 38 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1299 Dod-Chr5 36538751 36542368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1299 K03115 - gmx:100799304 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0912 02 11736746 11739757 Dod05g1299 05 36538751 36542368 PCT