Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0912 ATGTATAGTAACAGAGAGCGAGCAGAAGTAGGAGGGTCGGAGGGTGTGGGTGTTGATCGCAGGAAGCGAATCAACGAGGTGCTGGACAAGCAGTTGCAGCGATCCTCTCCCTCCACTTCCTCTTCAAGGCCCATCAAGGCCCAAGCCCAAGCCCAAGCCCACTCTCCCTCTGACATCTCCGAGGAATCCGAAACCGACACTGGTGGATCAGATGTTAGCGGTTCCGACGATGGGGACGACATCTCTTGGATCTCGTGGTTTTGCAATCTCAGGGGAAACGAGTTCTTCTGCGAGGTCGACGATGATTACATCCAGGACGATTTCAACCTCTGTGGATTGAGCAGCCAAGTGCCTTATTACGATTATGCCCTTGATTTGATTCTCGATGTTGATTCCTCCCACGGTGACATGTTCACAGAAGAACAGAATGAGTTGGTTGAATCAGCGGCCGAGATGCTTTATGGTCTGATTCATGCCCGATACATTTTGACAGGCAAAGGAATGGCCACCATGCTGGACAAGTACAAAAGCTATGACTTTGGTAGATGTCCAAGAGTTTACTGCTCGGGACAACCTTGCCTTCCAGTTGGTCAGTCAGACATACCTAGGTCAAGTACTGTGAAAATATATTGCCCCAGGTGTGAAGACATTTATTACCCACGGTCCAAGTATCAAGGTAATATTGATGGAGCTTATTTTGGAACTACATTTCCTAACCTCTTCCTGATGACTTATGGGCATCTGAAGCCACAAAAGCTGCCACAGAGCTATGTTCCACGGGTTTTTGGTTTCAAAGTTCACAAGCCATGA 810 0.4827 MYSNRERAEVGGSEGVGVDRRKRINEVLDKQLQRSSPSTSSSRPIKAQAQAQAHSPSDISEESETDTGGSDVSGSDDGDDISWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVDSSHGDMFTEEQNELVESAAEMLYGLIHARYILTGKGMATMLDKYKSYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPNLFLMTYGHLKPQKLPQSYVPRVFGFKVHKP* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0912 269 MobiDBLite consensus disorder prediction 30 72 - -
Dod02g0912 269 PRINTS Casein kinase II regulatory subunit family signature 179 200 IPR000704 GO:0005956|GO:0019887
Dod02g0912 269 PRINTS Casein kinase II regulatory subunit family signature 82 98 IPR000704 GO:0005956|GO:0019887
Dod02g0912 269 PRINTS Casein kinase II regulatory subunit family signature 154 175 IPR000704 GO:0005956|GO:0019887
Dod02g0912 269 PRINTS Casein kinase II regulatory subunit family signature 99 113 IPR000704 GO:0005956|GO:0019887
Dod02g0912 269 PRINTS Casein kinase II regulatory subunit family signature 201 222 IPR000704 GO:0005956|GO:0019887
Dod02g0912 269 PRINTS Casein kinase II regulatory subunit family signature 229 246 IPR000704 GO:0005956|GO:0019887
Dod02g0912 269 SUPERFAMILY Casein kinase II beta subunit 80 268 IPR035991 GO:0005956|GO:0019887
Dod02g0912 269 ProSitePatterns Casein kinase II regulatory subunit signature. 183 214 IPR000704 GO:0005956|GO:0019887
Dod02g0912 269 PANTHER CASEIN KINASE II SUBUNIT BETA 5 268 IPR000704 GO:0005956|GO:0019887
Dod02g0912 269 MobiDBLite consensus disorder prediction 12 29 - -
Dod02g0912 269 SMART CK_II_beta_2 82 265 IPR000704 GO:0005956|GO:0019887
Dod02g0912 269 Pfam Casein kinase II regulatory subunit 82 265 IPR000704 GO:0005956|GO:0019887
Dod02g0912 269 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 76 179 IPR016149 GO:0005956|GO:0019887
Dod02g0912 269 Gene3D - 180 253 - -
Dod02g0912 269 MobiDBLite consensus disorder prediction 1 77 - -
Dod02g0912 269 PANTHER CASEIN KINASE II SUBUNIT BETA-2 5 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0912 Dod-Chr2 11736746 11739757 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0912 K03115 - gmx:100793573 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0912 02 11736746 11739757 Dod02g0912 02 11736746 11739757 ECH
Dod02g0912 02 11736746 11739757 Dod05g1299 05 36538751 36542368 PCT