Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0945 ATGATCAGACTGTTCAAAGTAAAGGAAAAGCAGAGAGAACTTGCAGAGAATGCCAGTGGAGGGCCACCAGTTAAGAAGCAATCTGCTGGGGAGTTGCGTCTTCACAAAGCTCCTTCATTCAAGGAAAAGCAAGTATGTGTATCCATCCAAGAAGCATCAATGGATATAAGTGAGTTGAATCTTCCAAAATCCTGTAACATACAATTCCCCAATGGTAAAGATGACCTGATGAACTTCGAAGTTTCAATCCGACCTGATGAAGGATATTATGTAGGTGGCACATTTTTGTTTTCCTTCCAAGTGTCTCCCATCTATCCACATGAGGCACCCAAGGTCAAGTGCAAGACAAAGCTCTACCACCCGAATATTGACTTGGAGGGAAATGTTTGCCTCAACATTTTACGAGAAGATTGGAAGCCTGTGCTCAATATAAACACTGTCATCTATGGATTGTATCATCTCTTTACGGAACCAAATTACGAGGATCCGCTGAATCATGATGCTGCTGCAGTCTTGAGAGAAAACCCAAAATTGTTTGAGTCTAATGTGAGAAGGGCTATGGCTGGTGGGTATGTGGGCCAAACCTTTTTCACTCGTTGTATGTAA 606 0.4241 MIRLFKVKEKQRELAENASGGPPVKKQSAGELRLHKAPSFKEKQVCVSIQEASMDISELNLPKSCNIQFPNGKDDLMNFEVSIRPDEGYYVGGTFLFSFQVSPIYPHEAPKVKCKTKLYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNYEDPLNHDAAAVLRENPKLFESNVRRAMAGGYVGQTFFTRCM* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0945 201 Pfam Ubiquitin-conjugating enzyme 62 186 IPR000608 -
Dod05g0945 201 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 43 191 - -
Dod05g0945 201 Gene3D Ubiquitin Conjugating Enzyme 47 201 IPR016135 -
Dod05g0945 201 SMART ubc_7 47 192 - -
Dod05g0945 201 CDD UBCc 73 185 IPR000608 -
Dod05g0945 201 PANTHER - 43 191 - -
Dod05g0945 201 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 47 192 IPR000608 -
Dod05g0945 201 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 119 134 IPR023313 -
Dod05g0945 201 SUPERFAMILY UBC-like 55 197 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0945 Dod-Chr5 18819492 18829520 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0945 K10579 - gmx:100783122 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0609 02 7861366 7864629 Dod05g0945 05 18819492 18829520 PCT