Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0609 ATGATAAAATTTTCCCTCATGCTAGAGTTGATTGCTTCTTGTAGGAATATGATTAAACTATTTAAAGTAAAGGAAAAGCAGAGAGAACTTGCAGAAAATGCAAATGCAAGTGGTGGAGCACCGGTTAAGAAGCAAAGTGCTGGCGAGTTGCGTCTTCACAAAGATATAACTGAGCTGAATCTTCCAAAATCTTGCACCATACAATTCCCCAATGGCAAAGATGACTTGATGAACTTCGAGGTTTCAATTCGACCTGATGATGGGTATTACTTAGGTGGCACATTTTTGTTTTCTTTCCAAGTATCTCCCATCTATCCACATGAGGCACCAAAGGTTAAGTGCAAGACAAAGGTCTACCATCCAAATATTGACTTGGAAGGAAATGTTTGTCTCAACATCTTAAGGGAAGATTGGAAACCTGTCCTCAATATAAACACTGTTATCTATGGCTTGTATCATCTATTCACGGAACCAAATTATGAGGATCCTCTGAATCATGAAGCTGCTGCTGTGCTGAGAGATAACCCAAAGTTGTTTGAATCTAATGTGAGGAGGGCTATGGCTGGTGGTTATGTGGGGCAAACCTTCTTCCCTCGCTGTATCTAG 606 0.4043 MIKFSLMLELIASCRNMIKLFKVKEKQRELAENANASGGAPVKKQSAGELRLHKDITELNLPKSCTIQFPNGKDDLMNFEVSIRPDDGYYLGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFPRCI* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0609 201 Pfam Ubiquitin-conjugating enzyme 51 186 IPR000608 -
Dod02g0609 201 CDD UBCc 51 185 IPR000608 -
Dod02g0609 201 Gene3D Ubiquitin Conjugating Enzyme 43 201 IPR016135 -
Dod02g0609 201 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 35 191 - -
Dod02g0609 201 SMART ubc_7 50 192 - -
Dod02g0609 201 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 47 192 IPR000608 -
Dod02g0609 201 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 119 134 IPR023313 -
Dod02g0609 201 SUPERFAMILY UBC-like 34 199 IPR016135 -
Dod02g0609 201 PANTHER - 35 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0609 Dod-Chr2 7861366 7864629 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0609 K10579 - gmx:100813186 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0609 02 7861366 7864629 Dod02g0609 02 7861366 7864629 ECH
Dod02g0609 02 7861366 7864629 Dod05g0945 05 18819492 18829520 PCT