Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0099 ATGTCCATGATGTTGGTGAAGAAGCTCGTCGAGAAAGCTTCCATAAAGAAGCCTGGAGGAAATTCATCAGATGGGTTAAAAGCTAGTGATGTAGCTCCAAGGGTGGTATTTCATCAAGGGGTGCCATCGGGTGGTGCCAAGTTTGCCTATGACAACATTCAGAAGATACTTGCTCTTTCCACAAAGGATGGCCGGATTAAACTATATGCAAAAGGTAATGTCCAAGTCCTACTTGAATCCAGTGAACAACTGCCTAGCAAATTTTTACAGTTCATCCAGAACCAAGGCATCCTTGTGAATGTCACTCCCAATAACCATATTGAGGTTTGGGACATAGACAATAAACTATTGTCTGACGCGTACATTGTTAAGGAAGAAATCACTTCCTTTGCAGTCATTCAGCATAGCCTATACATGTACATTGGAGATTCTAATGGAAACATTTCAGTTTTGAAGCTTGATCAAGAACCTTGGCATATGGTGCAGATGAAATACACCATACCCCTTTCAGCTTCCTATGGGAATTCTGAAGTGCCCCATGATGCTGCTGTGGCACATATACTGCCTCAACCAGCAGCTGAAAGTAAGAGGGTCCTCATAATCTTTAGAAATGGCCAAATAATTTTATGGGATATTCGAGAAAGCAGAACTATTTTCAGAACAGGTGGAAACATGTCACAACCACTGTATAATGAAACAAAGAAGGTGACTTCTGCATGTTGGGCCTGTCCTTTTGGAAGAAAAGTGGTTGTAGGTTACAACAATGGAGAGCTCTTCATTTGGAGTATCCCCTCTCCAAACATGGGAGATGGTTTGGCACCTGACTCTAGTAGTCAAAACACCCCCTTGCTCAAATTTAACTTAGGATATAAGTCAGAGAAAATTTCCATCGGATCAATGAAGTGGGTTTATGCCGAAGGAAAGGCTAGTCGACTTTATGTCATGGGAGCTTCTGACAACACACCTTCAAACTCATTGCAGGTAGTGTTGTTGAATGAGAGCACAGAATCTCGCATGATTAAGTTGGGACTTCATTTGTCTGAATGTTGTATTGACATGGAGATCATATCAACTTCAACTGAACAAAGCAAGCATAAACAAGATTTTTTTCTTCTGCTTGGGAAGTCAGGCCATGTGTATCTATATGATGATAGTTTGATTGAAAGATATCTGCTACAATGCCAGTCTAAGTTGTCACCCTCACTTCCAAAGGAAGTGATTGTGAAATTACCACTGGCAGATTTAAGCATCACTACAGCAAAATTCATCTCCAGCAATACCAATGTGTTAAATATTGAAGATGAGTATTACAGAGAGCTGATAAAAAATTATCCACCGCTCATCAATGTTGAAACTAATCAAAAGGATGGGATTATCCTAAGTTCTGCCAAATTTACTGGATTTTCGAAAGTTCAAAACCTGTTCATAACTGGACACAGCAATGGAGCTGTAACCTTCTGGGATGCTTCATGTCCCCTTTTCATCCCAATTTTTCAATTAAAGCAACAGAGTGAAAATGACTTTTCTTTAAGTGGCATACCCTTGACAGCTTTATATTATCATAGCACCTCTCCTCTTCTTGTTTCTGGTGATGAGAGTGGAACGGTTCGCATCTTTAGATTCAAACCTGAACCATATACCATGAACAGCTTCATGTCTCTTGCTGGAGGTACAAAGAAAGGGACTGATCATATCATCCATAGTGTGAAACTTGTAAAGATTAATGGTGCTGTACTTTCTATGAACATAAATCACAGCTCAACACATCTTGCTGTTGGTTCTGATCAAGGACATGTTTCAGTTTTTAGCTTGGATGGCCCAACTTTGTTATATCAGAAACATATTGCTAGTGAAATTTCTGCTGGTATCATCTCTCTGCAGTTCCTAACCTGCAGTTTGCATGGTTTTGAGAAAAACATTTTAGCAGTCGGAACAAAGGACTCATCTGTTCTGGCACTTGATAGTGAAACTGGAAATGCACTGGGCACTGGAACCGTTCATCCAAAGAAGCCCTCAAAAGCTCTATTTATGCAGGTGTTGGATGGACAAGGTGAACCCATCACAGGATCAATTACTAATACTGAGGATGCAATAACAAAGCAATCGTACATTCTGCTTTGTTCTGAGAAAGCTTTATATATCTATTCCTTAGTCCATGCTGTTCAGGGAGTTAGAAAGGTGCTTTACAAGAAGAAGTTCCATTCCTCTTCCTGCTGCTGGGCATCAATATTTTGCAGCCCCTCTGATATTGGCCTTATACTCCTTTTCACCAGTGGAAAAGTCGAAATAAGGTCTTTGCCAGAGTTATCCCCGGTTGTGGAGACTTCAATTAGAGGTTTCACTTATTCACCTCCAAAATTGAAGTCATTTTCTGACAGCCAGATATGTTGTTCATCCAGAGGAGACCTTGTTTTGGTAAATGGTGATCAAGAAATTTTTGTTGTCTCACTATTGGTCCAAAGTAACATTTTCAGGCTTTTGGATTCTATTAGTACCATCTACAGAAAAGAAAGGATGCCATCTCAAGAAGAGCTTGTCCCTGGCCCAGTCATCCATAAGGAAAAGAAAAAGGGTATATTCAGCTCAGTTATCAAAGATATTACTGGCAGTAAAGAAAAGCATGGGCCCCTCGCGGAAACAGAAGATTCTAAAGAAAGTATCCAGGAACTCTCTGTGGTCTTTTCAAATGCAAATTTCCCTTGTAATGCAGATAACAATGATAACCAGAATGTTGATGAAGATGATGCTGAATTAGACATAGATGACATTGACCTAGACGATCATGGAGAAAAACAAAAAGAGCATAGTATATTGGGATTGGGAGCTCTTAATAAAAAGAAATTGGCTGGAAAGCTTCACGCTCTAAAAGATAGATTAAAAGAGATGAAGGGCAACATACAGAAATCATCAGGTAAGGAAGAGCAACAACACGAGCAAGCCGGTGCAGTGGATCAAATTAAGAAAAAATATGGGTTTTCTTCTTCATCAAATGAAACAAGCGCTGCTAAGTTGGCAGAAAGTAAGCTACAGGAGAACATGAAAAAACTGCAGGGTATCAACATTCGAACTACAGAAATGCAGGATACAGCAAAATCATTTTCATCATTGGCAAACCAAGTGCTGCGAACTGCAGGACAGGATAGGCAAAGTTGA 3153 0.3996 MSMMLVKKLVEKASIKKPGGNSSDGLKASDVAPRVVFHQGVPSGGAKFAYDNIQKILALSTKDGRIKLYAKGNVQVLLESSEQLPSKFLQFIQNQGILVNVTPNNHIEVWDIDNKLLSDAYIVKEEITSFAVIQHSLYMYIGDSNGNISVLKLDQEPWHMVQMKYTIPLSASYGNSEVPHDAAVAHILPQPAAESKRVLIIFRNGQIILWDIRESRTIFRTGGNMSQPLYNETKKVTSACWACPFGRKVVVGYNNGELFIWSIPSPNMGDGLAPDSSSQNTPLLKFNLGYKSEKISIGSMKWVYAEGKASRLYVMGASDNTPSNSLQVVLLNESTESRMIKLGLHLSECCIDMEIISTSTEQSKHKQDFFLLLGKSGHVYLYDDSLIERYLLQCQSKLSPSLPKEVIVKLPLADLSITTAKFISSNTNVLNIEDEYYRELIKNYPPLINVETNQKDGIILSSAKFTGFSKVQNLFITGHSNGAVTFWDASCPLFIPIFQLKQQSENDFSLSGIPLTALYYHSTSPLLVSGDESGTVRIFRFKPEPYTMNSFMSLAGGTKKGTDHIIHSVKLVKINGAVLSMNINHSSTHLAVGSDQGHVSVFSLDGPTLLYQKHIASEISAGIISLQFLTCSLHGFEKNILAVGTKDSSVLALDSETGNALGTGTVHPKKPSKALFMQVLDGQGEPITGSITNTEDAITKQSYILLCSEKALYIYSLVHAVQGVRKVLYKKKFHSSSCCWASIFCSPSDIGLILLFTSGKVEIRSLPELSPVVETSIRGFTYSPPKLKSFSDSQICCSSRGDLVLVNGDQEIFVVSLLVQSNIFRLLDSISTIYRKERMPSQEELVPGPVIHKEKKKGIFSSVIKDITGSKEKHGPLAETEDSKESIQELSVVFSNANFPCNADNNDNQNVDEDDAELDIDDIDLDDHGEKQKEHSILGLGALNKKKLAGKLHALKDRLKEMKGNIQKSSGKEEQQHEQAGAVDQIKKKYGFSSSSNETSAAKLAESKLQENMKKLQGINIRTTEMQDTAKSFSSLANQVLRTAGQDRQS* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0099 1050 SUPERFAMILY WD40 repeat-like 467 817 IPR036322 GO:0005515
Dod05g0099 1050 CDD R-SNARE_STXBP5_6 985 1042 - -
Dod05g0099 1050 Pfam Lethal giant larvae(Lgl) like, C-terminal 702 834 IPR013905 -
Dod05g0099 1050 Gene3D - 45 385 IPR015943 GO:0005515
Dod05g0099 1050 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 4 1049 - -
Dod05g0099 1050 Coils Coil 945 972 - -
Dod05g0099 1050 SUPERFAMILY WD40 repeat-like 52 605 IPR036322 GO:0005515
Dod05g0099 1050 Gene3D - 444 679 IPR015943 GO:0005515
Dod05g0099 1050 SMART WD40_4 452 488 IPR001680 GO:0005515
Dod05g0099 1050 SMART WD40_4 562 603 IPR001680 GO:0005515
Dod05g0099 1050 SMART WD40_4 222 262 IPR001680 GO:0005515
Dod05g0099 1050 SMART WD40_4 113 152 IPR001680 GO:0005515
Dod05g0099 1050 SMART WD40_4 501 540 IPR001680 GO:0005515
Dod05g0099 1050 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 4 1049 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0099 Dod-Chr5 1399871 1411996 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0099 - - gmx:100793138 1632.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0365 02 4935421 4943811 Dod05g0099 05 1399871 1411996 PCT