Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0365 ATGTTTGTCAAGAAGCTCGTGGAGAAAGCTTCCATAAAGAAGCCAAGTGGAAATTCATCAGATGGGTTAAAAGCTAGCGATGTGGATCCAAGATTGGTATTTCATCAAGGAGTACCATCTGGTGGTGCCAAGTTTGCCTATGACAACATTCACAAGATACTAGCTATTTCTACAAAGGATGGACGCATTAAACTATTTGGAGAAGATAATGCCCAAGTTCTACTTGAATCTAGTGAGCCAGTGCCTAGCAAGTGTTTACAGTTCATCCAGAACCAAGGCATCCTTATAAATGTCACTGCCAATAACCATATCGAGGTTTGGGACATAGACAAGAAGCTGTTGTCTGATGTTTACATTGTTAAAGAAGAAATCACTTGCTTTGCTGTCGTTCAACATAGCTTCTATATGTATGTTGGAGTTTCAAATGGTAAAATCTCAGTATTGAAGCTTGATCAAGAATCATGTCACATGGTACGGACGAAATACACCATACCCTTCTCAGCTTCTTATGGGAGTTCAACTGAAGTGTCTGAAGATACAGTTGTGACACATATACTGCCTCAACCAGCAGCCGAAAGTAAGAGAGTTCTTATAATATTTAGAAATGGGCAAATAATACTATGGGATATTCGAGAAAGCAGATCCATTTTCAGAACGGGAAAAATGGCACAACAACTGTACAGTGAAACAAAGAAGGTTTCTTCTGCATGTTGGGTATGTCCTTTTGGAACCAAGGTGGTTGTAGGGTACAACAATGGAGAGCTCTACATTTGGAGCATCCCTTCTGTGAAAAATGGAAATGGTTCAACATCTGATTATAGTAGTCAAAACACTCCTTTGTTCAAGCTTAACTTAGGATATAAATCAGACAGAACGCCCATAGGATCAGTAAAATGGATTTATGCTGAAGGAAAGGCTAGTCGACTATATGTCATGGGAGCTTCTGACTATGCACCTTCAAACTCATTGCAGGTTGTGTTGTTGAATGAGCAATTTGAATCTCGTACAATTAAGTTGGGACTTCATTTATCTGAAAGCTGTATTGACATGGAGATCATATCAGCCTCAAGTGAGCAAAGCAAGCATAAACAAAATTCTTTTCTTTTGCTTGGGAAATCAGGATATGTATATCTGTATGATGATAGTTTGATTGAAAGGTATCTACTGCAATACCAATCTAAGTCCAGTTCCTCACTGCCAAGGGAAGTGGTTGTGAAGTTACCACTGACAGATTCCAGCATCACGACTGCAAAATTCATCTCCAACAGTGCCAGTATGTTAAATTCTGGTGACGAGTATTACAGTCAGCTGATAAAAAATTATCCACCACTTATTCCCATAGAAACAAGTTACAAAGATGGGATTAACCTGAGTTATGCCAACTTCACTGGATTTTCAAATGTTAAAAACTTGTACATAACTGGACACAGCAATGGAGCTATAACTTTCTGGGATGCAACATGTCCCTTTTTCAACCCAATTTTGCAATTGAAACAACAGAGTGAAAATGATTTTTCTTTAAGTGGTATACCCGTGACAGCATTATATTTTGATGTCAAATCTCCTCTCCTTGTTTCTGGTGACCAAAGTGGAATGGTTCGCATCTTTAGATTCAAACCTGAACCATATGCCTCCAGTTTCATGTCTCTAACTGGAGGTACAAAGAAAGGGACTGATCACGTGATCCACAGCATGAAAATTGTAAAGACTAGTGGTGCTGCACTTTGTATGTACATAGATCACAGCTCTAAGCATCTTGCTGTCGGTTCTGATCAAGGAAACGTTTCAGTTATTAACATTGATGGCCCTTCTCTATTATATCAGACACATGTAGCAAGTGAAATTTCTACTGGTATAGTGTCTCTACAGTGCATAACATGCAGTTTGCAAGGTTTTGAGAAAAACATATTAGCAGTCGGAACAAAAGACTCATCTGTTCTGGCACTAGATATCGAAACTGGAAACACACTGAGCACTGGAATGGTTCATCCTAAGAAGCCATCTAAAGCTTTGTTTATGCAGGTGTTGGATGGACAAGGTGAACCAATCTCAGGTTCAATTACAAAAGATGGCTTGGACTTGAGAGAAGGGAATCATATTGTGGTTGCAACAGCAAAGCAATTCTACATTTTGCTGTGTTCTGAGAAAGCTGTATATGTTTACTCTTTTGTGGATGCTGTACAGGGAGTCAAAAAGGTGCTTTACAAGAAGAAGTTTCATTCCTCTTCCTGTTGTTGGGCATCAACATTTTACAGCTCCTCTGATTTTGGCCTAGTACTCATTTTCACTAGTGGAAAAGTAGAATTAAGGTCTTTACCTGAGTTATCTCTGATAGTGGATACTTCAATTAGAGGCTTCACTTATTCACCTCCAAAATTGAAGTCGTTTTCTGAAACTCAGATATGTTGTTCATCCAGAGGAGATCTGGTTTTGGTAAATGGGGACCAGGAAATTGTTGTTCTCTCATTGTTGGTCCACAGGAATATTTTCAGACTCTTGGACTCCGTTAGCTGCATTGACTTGAAGAAAAGGACGCCATCACTAGAAGAACTTGCTCCTAATCCGGTCATACATAAGGAAAAGAAGAAGGGTATATTCAGCTCTGTTATCAAAGATTTCACTGGCAGTAAAGAAAAGCATGTGCCCTTAATGGAAAAAGAAGATCCAAAAGAAAGTATACGTGAACTCTCAGCAATATTTTCAAATGCAAATTTTCCAGGTGATGCTGACAATAATGAAAACCGGATCATGGATGAAGATGAGCCTGAATTATTAACGTTAGGTATAACAATGTCAGTTAACTTATGTGCAACAGAATATTACTTAATACATTAG 2835 0.3869 MFVKKLVEKASIKKPSGNSSDGLKASDVDPRLVFHQGVPSGGAKFAYDNIHKILAISTKDGRIKLFGEDNAQVLLESSEPVPSKCLQFIQNQGILINVTANNHIEVWDIDKKLLSDVYIVKEEITCFAVVQHSFYMYVGVSNGKISVLKLDQESCHMVRTKYTIPFSASYGSSTEVSEDTVVTHILPQPAAESKRVLIIFRNGQIILWDIRESRSIFRTGKMAQQLYSETKKVSSACWVCPFGTKVVVGYNNGELYIWSIPSVKNGNGSTSDYSSQNTPLFKLNLGYKSDRTPIGSVKWIYAEGKASRLYVMGASDYAPSNSLQVVLLNEQFESRTIKLGLHLSESCIDMEIISASSEQSKHKQNSFLLLGKSGYVYLYDDSLIERYLLQYQSKSSSSLPREVVVKLPLTDSSITTAKFISNSASMLNSGDEYYSQLIKNYPPLIPIETSYKDGINLSYANFTGFSNVKNLYITGHSNGAITFWDATCPFFNPILQLKQQSENDFSLSGIPVTALYFDVKSPLLVSGDQSGMVRIFRFKPEPYASSFMSLTGGTKKGTDHVIHSMKIVKTSGAALCMYIDHSSKHLAVGSDQGNVSVINIDGPSLLYQTHVASEISTGIVSLQCITCSLQGFEKNILAVGTKDSSVLALDIETGNTLSTGMVHPKKPSKALFMQVLDGQGEPISGSITKDGLDLREGNHIVVATAKQFYILLCSEKAVYVYSFVDAVQGVKKVLYKKKFHSSSCCWASTFYSSSDFGLVLIFTSGKVELRSLPELSLIVDTSIRGFTYSPPKLKSFSETQICCSSRGDLVLVNGDQEIVVLSLLVHRNIFRLLDSVSCIDLKKRTPSLEELAPNPVIHKEKKKGIFSSVIKDFTGSKEKHVPLMEKEDPKESIRELSAIFSNANFPGDADNNENRIMDEDEPELLTLGITMSVNLCATEYYLIH* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0365 944 Pfam Lethal giant larvae(Lgl) like, C-terminal 729 829 IPR013905 -
Dod02g0365 944 SUPERFAMILY WD40 repeat-like 465 821 IPR036322 GO:0005515
Dod02g0365 944 SMART WD40_4 110 149 IPR001680 GO:0005515
Dod02g0365 944 SMART WD40_4 400 485 IPR001680 GO:0005515
Dod02g0365 944 SMART WD40_4 498 537 IPR001680 GO:0005515
Dod02g0365 944 SMART WD40_4 558 599 IPR001680 GO:0005515
Dod02g0365 944 SMART WD40_4 219 259 IPR001680 GO:0005515
Dod02g0365 944 Gene3D - 463 841 IPR015943 GO:0005515
Dod02g0365 944 Gene3D - 30 180 IPR015943 GO:0005515
Dod02g0365 944 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 1 925 - -
Dod02g0365 944 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 1 925 - -
Dod02g0365 944 Gene3D - 181 398 IPR015943 GO:0005515
Dod02g0365 944 SUPERFAMILY WD40 repeat-like 47 539 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0365 Dod-Chr2 4935421 4943811 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0365 - - gmx:100782049 1490.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0365 02 4935421 4943811 Dod02g0365 02 4935421 4943811 ECH
Dod02g0365 02 4935421 4943811 Dod05g0099 05 1399871 1411996 PCT