Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3156 ATGATCCCGAGTCTTTTTGCCTATGGTCTCCTTCAGTGCCTGAATAGATTCTTGCAAACCCAAAGTATCGTATTTCCAATGATGCTTAGCTCTGGAGTTACTACTTTGCTGCATATTCTTGTATGTTGGATTATGGTATTCAAATCTGGGCTAGGGAACAGAGGGGCTGCCATAGCGAATGCTATATCTTACTGGTTGAATGTCTTGATCCTGTCACTCTATGTCAAGTTTTCTCCTTCATGTTTGAAAACTTGGACAGGCCTTTCAAAAGAGGCATTGCATTACATCCCCTCTTTTCTGAGGCTTGCCATTCCTTCAGCAGTTATGGTTTGCCTTGAAATGTGGTCATTTGAAATGATGGTTCTCCTTTCTGGCCTTCTCCCAAATCCGAAGCTAGAAACATCAGTGCTTTCTATCTGTCTGAACACTTCAACAACTGTTTGGATGATCGCCTTTGGACTCAGTGGAGCAGTAAGCACTCGTGTCTCAAATGAACTAGGAGCTGGCCATCCACGGGCTGCACGTTTAGCTGTGTATTTTGTCTCAGTAATGGCCATTGTTGAGGGCTTCTTTGTTGGAACAGTGATGATGTTAATACGCAATATCTGGGGCTATGCGTATAGCAATGAAGCAGAAGTAGTCAGATATGTAGCAACCATGTTGCCAATTCTTGCAACATCCATTTTCCTGGATGGAATCCAATGCGTTCTTTCAGGCACGGTTAGAGGATGTGGTCGGCAAAAATTTGGTGCTTTAGTTAATCTAGGATCATACTATTTAGTTGGGATTCCATCAGCTATCTTATTTGCTTTTGTCTTGCACCAAGGTGGCAAGGGTCTTTGGCTCGGGATCATATGTGCACTCGTTGTTCAAGTGTCATGTTTTCTTATCATAACAATACGTACTGATTGGGAGCGAGAGGCAAAGAAGGCTAAAGACAGGGTCAACGATTCAAGAAGAGCAGAGGGCATAGTCTCATGA 981 0.4322 MIPSLFAYGLLQCLNRFLQTQSIVFPMMLSSGVTTLLHILVCWIMVFKSGLGNRGAAIANAISYWLNVLILSLYVKFSPSCLKTWTGLSKEALHYIPSFLRLAIPSAVMVCLEMWSFEMMVLLSGLLPNPKLETSVLSICLNTSTTVWMIAFGLSGAVSTRVSNELGAGHPRAARLAVYFVSVMAIVEGFFVGTVMMLIRNIWGYAYSNEAEVVRYVATMLPILATSIFLDGIQCVLSGTVRGCGRQKFGALVNLGSYYLVGIPSAILFAFVLHQGGKGLWLGIICALVVQVSCFLIITIRTDWEREAKKAKDRVNDSRRAEGIVS* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3156 326 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 314 - -
Dod04g3156 326 PANTHER PROTEIN DETOXIFICATION 1 314 - -
Dod04g3156 326 CDD MATE_eukaryotic 1 310 IPR045069 GO:0042910|GO:1990961
Dod04g3156 326 Pfam MatE 105 267 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod04g3156 326 Coils Coil 301 321 - -
Dod04g3156 326 TIGRFAM matE: MATE efflux family protein 1 281 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3156 Dod-Chr4 55232711 55234787 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3156 K03327 - gmx:100792588 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3156 04 55232711 55234787 Dod02g3710 02 75846979 75852414 PCT
Dod02g3712 02 75868458 75874045 Dod04g3156 04 55232711 55234787 PCT