Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3710 ATGGAGCGAGAACACCAAAAGGCACCATCACTCCGTTCTCCCTTGATTCAAGCCACAAGTCAAGATGGATTCATAGTTGATGTTGAGCAAAACAAGAAGCAAGGAGGAATAGGAAGAAGGGAAGTTCTTGAAGAAGTGAGGAAGCAGTTATGGCTGGCAGGGCCTTTGATATCTGTCAGCCTGCTGAATTTCTGCCTACAAGTCATATCTGTCATGTTTGTTGGGCATCTCGGAGAGTTGGCTCTCTCTGGTGCTTCAATGGCCACTTCTTTTGCCTCTGTGACAGGTTTTAGTTTATTGGTGGGAATGGCAAGTGCCTTGGACACCCTATGTGGCCAATCATATGGAGCAAAGCAGCACCGAATGTTAGGCATACACATGCAGAAAGCCATGCTCATTCTTATGATTGTCAGCATTCCGCTTGCGATTATTTGGGCGAACACAAGATCCATTCTGACTTTCTTGGGCCAAGATCCTGAAATATCCGAGGAAGCTGGGAACTATGCTCAATTAATGGTTCCAAGCCTTTTTGCTTATGGTCTTCTTCAGTGCCTGAACAGGTTCTTGCAAACCCAAAATATAGTTTTTCCAATGGTGTTCAGCTCAGCAGCGACAACTTTACTGCATATCCTTGTATGCTGGATTATGGTATTCAAGTCTGGACTGGGGAATAGAGGAGCTGCCATAGCAAATTCTATATCTTACTGGGTGAATGTTTTGATACTCTCACTCTATGTCAAGTTTTCTCCATCTTGTGCAAAGACTTGGACAGGCTTTTCCAAAGAGGCACTTCACAACATCCCTTCGTTTCTGAGGCTTGCCATTCCATCAGCTGTTATGGTTTGCTTGGAAATGTGGTCATTTGAAATGATGGTTCTTCTTTCTGGTCTTCTTCCAAATCCAAAGTTGGAGACATCAGTTCTTTCAATCTGCTTGAATACAGCATCAACTGTTTGGATGATCCCCTTTGGACTCAGTGGAGCTGTAAGCACTCGCGTTTCGAATGAACTCGGAGCTGGTCATCCCTGGACTGCACGTTTAGCAGTGTGTGTTGTCTTAGTGATGGCCATTATTGAGGGAACCATAGTTGGAATGGTGCTAATACTAATCCGCAATATTTGGGGCTATGCGTATAGTAATGAAGTAGAAGTGGTTGAATATGTAGCAGTTATGTTGCCAATTCTTGCAACATCCAACTTTCTGGATGGACTCCAATGTGTTCTTTCAGGCACTGCTAGAGGATGTGGTTGGCAGAAAATTGGTGCATTTATCAATCTGGGGTCATACTATTTGGTTGGGATTCCATCAGCTATTGTATTAGCTTTTGTGTTGCACATTGGTGGGAAGGGCCTCTGGCTAGGGATCATATGTGCACTCATTGTTCAAGTAATTTCTTTCCTAATAATTACTATAAGAACTGAATGGGAGCAAGAGGCAAAGAAGGCTACAGAAAGAGTTTATAATTCAATAACACACGAGAGCATAGTCTCATGA 1494 0.4331 MEREHQKAPSLRSPLIQATSQDGFIVDVEQNKKQGGIGRREVLEEVRKQLWLAGPLISVSLLNFCLQVISVMFVGHLGELALSGASMATSFASVTGFSLLVGMASALDTLCGQSYGAKQHRMLGIHMQKAMLILMIVSIPLAIIWANTRSILTFLGQDPEISEEAGNYAQLMVPSLFAYGLLQCLNRFLQTQNIVFPMVFSSAATTLLHILVCWIMVFKSGLGNRGAAIANSISYWVNVLILSLYVKFSPSCAKTWTGFSKEALHNIPSFLRLAIPSAVMVCLEMWSFEMMVLLSGLLPNPKLETSVLSICLNTASTVWMIPFGLSGAVSTRVSNELGAGHPWTARLAVCVVLVMAIIEGTIVGMVLILIRNIWGYAYSNEVEVVEYVAVMLPILATSNFLDGLQCVLSGTARGCGWQKIGAFINLGSYYLVGIPSAIVLAFVLHIGGKGLWLGIICALIVQVISFLIITIRTEWEQEAKKATERVYNSITHESIVS* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3710 497 PANTHER PROTEIN DETOXIFICATION 28 485 - -
Dod02g3710 497 TIGRFAM matE: MATE efflux family protein 55 452 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod02g3710 497 CDD MATE_eukaryotic 45 481 IPR045069 GO:0042910|GO:1990961
Dod02g3710 497 Pfam MatE 55 215 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod02g3710 497 Pfam MatE 276 438 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod02g3710 497 PANTHER MULTIDRUG RESISTANCE PROTEIN 28 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3710 Dod-Chr2 75846979 75852414 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3710 K03327 - gmx:100815319 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3710 02 75846979 75852414 Dod02g3710 02 75846979 75852414 ECH
Dod04g3156 04 55232711 55234787 Dod02g3710 02 75846979 75852414 PCT