Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3057 ATGGCGCTGAGCAACACCACTGCTAAACTATCAGAATTCCAACTCAGTTCTCGCTCTTCTTCTTCTTCCTCCACTCTCAGCCTCTTGTTGTTCTTCTCCACTTGTTCTCGCTCCCAATTGAAGCCCTCATTTCGCATTCTCAGATCCTTCTCTTCTCTTAGAACCAACGCCACCAACAACCCCACACGTTCGCACCCGAAACCCTCCCCAAAATTCAAGCCCTCCTCTGCCCCATGGCTCACCAAGTGGCCCCCCGCCGCTAGCCCCCAATTCCCCAACCCTAAACCATCCGTACGCCTCCCCGAACCCACCTCCGATGACCTCTTCGATCCCGATGACACTAGCTTCTCCGGCCAGGACAAAGGCCGCAACGCAATCGACAGGGTCGTTCTTCGCCTGCGCAATTTAGGGTTAGCTTCCAACGACGACGGCGGAGAGGGACTAAGCAGCGGGTTCGGTGGTTTGTTGCGCCGAGAGTGGATTCGCTGTGATGCTGCGTTGGCTGAGCGTGAAGTAGAACCTGGCGAGATGGTTCTGCCATGGGATAGAGACGACGAAGAGGAAGAGGAAGCAGAGCAGGGAGAGAAGGGGCCGAGGAGGAGGAGGGTGAAGCCGCCGAGTTTGGCGGAGCTGACGCTTGAGGAGGAGGAGCTGGAGCGGTTGCGGAGACTGGGAATGCGTCTGAGGGAGAAGGTGAATGTGGCCAAAGCTGGGCTCACCCAGGCTGTTCTGGACAAGATTCACGATCACTGGAGGAAGAACGAGGTTGTCAGGCTCAAGTTCCACGAGCTTCTTGCAAGGGACATGAAGACTGCTCATGAGATTGTTGAGCATAGAACAAGAGGATTGGTTATATGGAGGTCAGGAAGTTTTATGTTGGTGTACCGTGGTAGTAACTACGAAGGGCCAGTGCCCATAAGCCAACAGAATGGGAGTGTGTTAAGAACTGAAGACAGTAGTGATCCGGTTGTGAGGAATCAAGAACAGCCTGAGAACATGACACCGGAGGAAGCAGAGTTCGACAGGATGCTTGATGGCTTAGGTCCTCGTTTCGTTGAATGGTGGGGCACGGGAATACTTCCTGTCGATGCTGATTTACTTCCTCCCACGGTTCCTGGTTACAAAACACCTCTTAGGCTTCTTCCCACTGGAATGCGTCCGCGACTGACAGATGCAGAGCTTGACGAATATGCGGAAACTTTCCAAATCTCTTCCTTGTCATTTTGCTTTAAGTAG 1236 0.534 MALSNTTAKLSEFQLSSRSSSSSSTLSLLLFFSTCSRSQLKPSFRILRSFSSLRTNATNNPTRSHPKPSPKFKPSSAPWLTKWPPAASPQFPNPKPSVRLPEPTSDDLFDPDDTSFSGQDKGRNAIDRVVLRLRNLGLASNDDGGEGLSSGFGGLLRREWIRCDAALAEREVEPGEMVLPWDRDDEEEEEAEQGEKGPRRRRVKPPSLAELTLEEEELERLRRLGMRLREKVNVAKAGLTQAVLDKIHDHWRKNEVVRLKFHELLARDMKTAHEIVEHRTRGLVIWRSGSFMLVYRGSNYEGPVPISQQNGSVLRTEDSSDPVVRNQEQPENMTPEEAEFDRMLDGLGPRFVEWWGTGILPVDADLLPPTVPGYKTPLRLLPTGMRPRLTDAELDEYAETFQISSLSFCFK* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3057 411 ProSiteProfiles CRM domain profile. 211 307 IPR001890 GO:0003723
Dod04g3057 411 SUPERFAMILY YhbY-like 212 304 IPR035920 -
Dod04g3057 411 MobiDBLite consensus disorder prediction 85 99 - -
Dod04g3057 411 MobiDBLite consensus disorder prediction 306 335 - -
Dod04g3057 411 Coils Coil 211 231 - -
Dod04g3057 411 MobiDBLite consensus disorder prediction 176 205 - -
Dod04g3057 411 Pfam CRS1 / YhbY (CRM) domain 213 296 IPR001890 GO:0003723
Dod04g3057 411 MobiDBLite consensus disorder prediction 55 121 - -
Dod04g3057 411 SMART CRS1_YhbY_2 213 296 IPR001890 GO:0003723
Dod04g3057 411 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 7 395 - -
Dod04g3057 411 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 7 395 IPR045278 GO:0000375|GO:0003729
Dod04g3057 411 MobiDBLite consensus disorder prediction 306 333 - -
Dod04g3057 411 Gene3D - 211 309 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3057 Dod-Chr4 54337852 54339369 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3057 - - ahf:112707684 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3057 04 54337852 54339369 Dod02g3647 02 74676972 74681631 PCT