Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3647 ATGGCATTCATCACAACCACTTCTGCGAAACTCTCAGAATTGCCCCTCAAACCTTCTTCACCACTCTCATCAATCACAACTCATTATCCTTCTTCACGGTCCAACACCCTCTTCTTCATCTCTCTCTCCAAACCTTCATTCCGCACTCTCACACTCACTCCCTTTTTCTCTTCTTCTCTTCGAACCTCCCACCAACAACACACCAAACAGAACCACCGTTCCACACCAAAACCCAGCAACAACAACAACAACCCTTCTGCCCCGTGGCTCGTCAAAACCCCTTCCCACAACAACTCTCCCAAAAGGGTCACCGAATCTGTGACCAACGACCCAATTCACGATCAAATGGAAAATCGCCACTTTGACGGTGATAAAGTGCAAAACGCGGTTGAGAGGATCGTTCTAAGGTTAAGAAACTTGGGTTTGGGCTCAGAAGAAGAAGAAGAACAAGTAGAAGCAGAAAAAAGAGAAGAAGGGGTTGTTGTTGGTGGTGATGATTTTAAGGTGACCGGCGAAGAGAGGCTTGGGGAGCTTTTGAGAAGGGAATGGGTTAGGCCTGATGCAATGGTGAGTGATGATAAGGTTGTTGGTTATGATGATGATGATGGTGATGATGAGGTGGTTCTTCTGCCATGGCAGAGGGAAGAGGAACAAGAGAGAGAGAAGGGTGTTGTTGGAGGTGTTCGTCGTTTTGTCGAAGAGGGAGAGAAGGGGTTGAAAAGGAGGAGGGTAAAGGCTCCAACTTCGGCGGAATTGACACTTGAGGACGAGGTTTTGAGGAGGTTGAGGAGAGAAGGGATGCGTATTAGGGAGAGGGTCAGTGTCCCTAAAGCTGGGCTCACGAAGGAGGTGATGGAGAAGATTCATCAGAGGTGGAGGAAGGAGGAGTTGGTCAGGCTCAAGTTTCATGAGGACCTTGCAAGGGACATGAAGAGAGCTCATGAGATTGTTGAGCGTCGAACAGGAGGGTTGGTTACATGGAGGGCAGGAAGTGTTATGATGGTGTATCGTGGTACCAATTACCAAGGGCCTGCATCTGGGAGCCAGCACAATGAAAAGGAAGGTGATGGCTTTTTTGTGCCAGATGTCTTGTCAGAAAGTTCATTAAGAACAAATGACGGTAATGCGGCCTCATCATTGGAGAATAATGAGCCAATTGTGAGGAGTCAAGAGCAGCCTGAGAACATGACGGAGGAGGAAGCAGAGTACAATGCCCTGCTTGATGGTTTAGGTCCTCGTTTTGTTGAATGGTGGGGTACAGGAATACTTCCTGTAGATGCCGATTTACTTCCTCCTTCAGTTCCTGGTTACAAAACACCTTTTAGGCTTCTTCCTACTGGAATGCGTTCTCGACTAACAAATGCAGAGATGACCAATTTAAGGAATATTGCCAAATCACTCCCTTGTCATTTTGCCTTAGGGAGGAATAGACGTCATCAAGGTCTGGCGTGTGCTATTCTTAAGCTCTGGGAGAAAAGTTTAGTTGCAAAGATTGCTGTCAAACGTGGTATCCAGAACACAAACAATAAACTGATGGCTGAGGAGCTGAAGACATTGACAGGAGGTACCTTGCTTCTAAGGAATAAATATTACATTGTTATATATCGGGGGAAGGACTTTATTCCGTCAACTGTAGCTGAAGTTTTAGCTGAAAGACAGGAATTGACCAAACAGGTGCAGGATGTTGAAGAGAAGGTGCGGTCTGGAGTTGTCGATGGTACTCCATCTGTGCAAGGTGAAGCAAAAACAATGGCAGGATCTTTATCAGAGTTCTATGAAGCTCAGACATGCTGGGGAAGGGATATATCTACTGAAGAACGTGAGAAGATGATGGAAGAAGCTGCCAAAGCCAAGAATGCTAGGCTAGTCAGACATATTGAACTTAAACTAGTTGCTGCTGAGCGCAAAAAGCTTAGGGCAGAAAGGCTGTTAGCAAAAATAGAAGCATCTATGGTTCCGGCTGGTCCTGATTATGACCAGGAAACAATCACAGATGAAGAACGTGTTGTCTTCCGTAGGATTGGTCTAAGAATGAAGCCGTACCTACCACTTGGTGTACGTGGTGTTTTTGATGGTGTCATCGAGAACATGCATTTGCATTGGAAACACCGAGAGCTTGTAAAATTGATTACAAAACAAAAGACCCTTTCTTTTGTTGAAGACACAGCAAGGTTACTGGAGTATGAGAGTGGTGGAATCCTAGTGGCAATAGAGAGAGTTCCCAAAGGATTTGCTCTTATTTACTATCGTGGAAAGAATTATAAGCGGCCCATAACTCTGAGGCCTAGAAACCTTCTAACAAAGGCAAAGGCATTGAAGCATTCAGTGGCCATGCAACGTCATGAGAGAATGGGTCACTCCTCCGAGTTAGGCAGTTAA 2379 0.4573 MAFITTTSAKLSELPLKPSSPLSSITTHYPSSRSNTLFFISLSKPSFRTLTLTPFFSSSLRTSHQQHTKQNHRSTPKPSNNNNNPSAPWLVKTPSHNNSPKRVTESVTNDPIHDQMENRHFDGDKVQNAVERIVLRLRNLGLGSEEEEEQVEAEKREEGVVVGGDDFKVTGEERLGELLRREWVRPDAMVSDDKVVGYDDDDGDDEVVLLPWQREEEQEREKGVVGGVRRFVEEGEKGLKRRRVKAPTSAELTLEDEVLRRLRREGMRIRERVSVPKAGLTKEVMEKIHQRWRKEELVRLKFHEDLARDMKRAHEIVERRTGGLVTWRAGSVMMVYRGTNYQGPASGSQHNEKEGDGFFVPDVLSESSLRTNDGNAASSLENNEPIVRSQEQPENMTEEEAEYNALLDGLGPRFVEWWGTGILPVDADLLPPSVPGYKTPFRLLPTGMRSRLTNAEMTNLRNIAKSLPCHFALGRNRRHQGLACAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKTLTGGTLLLRNKYYIVIYRGKDFIPSTVAEVLAERQELTKQVQDVEEKVRSGVVDGTPSVQGEAKTMAGSLSEFYEAQTCWGRDISTEEREKMMEEAAKAKNARLVRHIELKLVAAERKKLRAERLLAKIEASMVPAGPDYDQETITDEERVVFRRIGLRMKPYLPLGVRGVFDGVIENMHLHWKHRELVKLITKQKTLSFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYKRPITLRPRNLLTKAKALKHSVAMQRHERMGHSSELGS* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3647 792 Coils Coil 600 620 - -
Dod02g3647 792 SUPERFAMILY YhbY-like 253 344 IPR035920 -
Dod02g3647 792 Coils Coil 623 650 - -
Dod02g3647 792 MobiDBLite consensus disorder prediction 61 107 - -
Dod02g3647 792 Pfam CRS1 / YhbY (CRM) domain 255 337 IPR001890 GO:0003723
Dod02g3647 792 Pfam CRS1 / YhbY (CRM) domain 452 536 IPR001890 GO:0003723
Dod02g3647 792 Pfam CRS1 / YhbY (CRM) domain 664 739 IPR001890 GO:0003723
Dod02g3647 792 SUPERFAMILY YhbY-like 452 543 IPR035920 -
Dod02g3647 792 MobiDBLite consensus disorder prediction 370 399 - -
Dod02g3647 792 ProSiteProfiles CRM domain profile. 661 761 IPR001890 GO:0003723
Dod02g3647 792 Coils Coil 545 565 - -
Dod02g3647 792 SUPERFAMILY YhbY-like 662 760 IPR035920 -
Dod02g3647 792 Gene3D - 252 352 IPR035920 -
Dod02g3647 792 Gene3D - 662 762 IPR035920 -
Dod02g3647 792 Gene3D - 451 544 IPR035920 -
Dod02g3647 792 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 8 784 - -
Dod02g3647 792 MobiDBLite consensus disorder prediction 370 392 - -
Dod02g3647 792 ProSiteProfiles CRM domain profile. 450 547 IPR001890 GO:0003723
Dod02g3647 792 SMART CRS1_YhbY_2 663 750 IPR001890 GO:0003723
Dod02g3647 792 SMART CRS1_YhbY_2 254 337 IPR001890 GO:0003723
Dod02g3647 792 SMART CRS1_YhbY_2 452 536 IPR001890 GO:0003723
Dod02g3647 792 ProSiteProfiles CRM domain profile. 252 348 IPR001890 GO:0003723
Dod02g3647 792 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 8 784 IPR045278 GO:0000375|GO:0003729
Dod02g3647 792 MobiDBLite consensus disorder prediction 72 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3647 Dod-Chr2 74676972 74681631 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3647 - - ahf:112802226 1098.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3647 02 74676972 74681631 Dod02g3647 02 74676972 74681631 ECH
Dod04g3057 04 54337852 54339369 Dod02g3647 02 74676972 74681631 PCT