Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2833 ATGGTTCGCTCCTACATTGAAAAGCCAAACTGTATAATTTTGGCTATTTCACCAGCTAATCAAGATCTTGCAACATCTGACGCAATTAAAATCTCCCGTGAAGTGGATCCTACTGGAGATAGGACCATTGGAGTTTTGACAAAGATTGATCTTATGGACAAGGGCACTGATGCTGTTGATATATTGGAAGGGAGAGCATATAGGTTAAAGTTTCCTTGGATTGGTGTTGTGAATAGATCACAAGCAGACATAAACAAGAATGTTGACATGATTGCTGCTAGGCGAAGAGAACGTGAGTACTTTACTAGTACGCCTGAGTATAAACACCTTGCTCACAGAATGGGTTCTGAACATCTGGCCAAGATGCTCTCAAAGCATTTGGAGACAGTTATCAAGTCCAAAATTCCAGGCATTCAATCTCTTATTAACAAAACAGTAGCTGAACTTGAAGCTGAACTAACACGTTTAGGAAAGCCTGTTGCAGCTGATGCTGGGGGAAAGCTGTATGCAATCATGGAAATATGCCGCTCATTTGATCAAATATTTAAAGAACATCTTGATGGCGTGCGGCCTGGAGGTGATAAAATATATAACGTCTTTGACAATCAGCTCCCTGCTGCTTTAAAAAGGTTGCAGTTTGATAAACAGCTTTCAATGGAAAATATAAGGAAACTCATCACGGAAGCTGATGGGTATCAACCTCATCTTATAGCTCCAGAACAAGGATATCGTCGTCTCATTGAATCTTCTCTGATTACTATCAGGGGCCCTGCTGAGGCTGCTGTTGATGCGGTTCATTCCCTTTTAAAGGACCTGGTTCACAGAGCTGTTAATGAGACTGTGGACTTGAAGCAATATCCTGGTCTCCGGGTTGAGGTTGGGAGTGCAGCTGTTGATTCATTAGAAAGAATGAAGGATGAAAGCAAAAAAGCAACACTACAGCTTGTTGATATGGAGTGTGGCTATCTGACGGTTGATTTCTTTAGGAAGCTTCCTCAAGATGTTGATAAGGGTGGCAATCCTACGCATTCAATTTTTGATAGATATAATGATTCGTATCTGAGGAGAATTGGTACCACAATTTTGTCTTATGTCAACATGGTCTGTGCAAGCCTGAGGCATTCAATTCCGAAGTCCATCGTCTATTGTCAAGTGCGGGAAGCAAAACGAAGCCTACTTGACCACTTCTTCACTGAGCTAGGCAAAATGGAGCCCAAGCGTTTGTCCTCATTGCTGAACGAGGATCCTGCAATTATGGAACGGCGTAGTGCCCTCGCAAAGAGGCTTGAGTTATACCGGAGTGCACAAGCTGAAATAGATGCAGTTGCATGGTCTAAGTAG 1341 0.4251 MVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPTGDRTIGVLTKIDLMDKGTDAVDILEGRAYRLKFPWIGVVNRSQADINKNVDMIAARRREREYFTSTPEYKHLAHRMGSEHLAKMLSKHLETVIKSKIPGIQSLINKTVAELEAELTRLGKPVAADAGGKLYAIMEICRSFDQIFKEHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESSLITIRGPAEAAVDAVHSLLKDLVHRAVNETVDLKQYPGLRVEVGSAAVDSLERMKDESKKATLQLVDMECGYLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTTILSYVNMVCASLRHSIPKSIVYCQVREAKRSLLDHFFTELGKMEPKRLSSLLNEDPAIMERRSALAKRLELYRSAQAEIDAVAWSK* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2833 446 PANTHER DYNAMIN 1 445 IPR022812 -
Dod04g2833 446 Gene3D - 1 145 IPR027417 -
Dod04g2833 446 ProSiteProfiles GED domain profile. 354 446 IPR020850 -
Dod04g2833 446 PRINTS Dynamin signature 60 79 IPR022812 -
Dod04g2833 446 PRINTS Dynamin signature 18 36 IPR022812 -
Dod04g2833 446 PRINTS Dynamin signature 37 53 IPR022812 -
Dod04g2833 446 Pfam Dynamin family 1 49 IPR045063 -
Dod04g2833 446 Gene3D Dynamin, middle domain 168 422 - -
Dod04g2833 446 PANTHER DYNAMIN-LIKE PROTEIN 1E 1 445 - -
Dod04g2833 446 CDD DLP_1 1 136 IPR001401 GO:0003924|GO:0005525
Dod04g2833 446 Pfam Dynamin central region 57 324 IPR000375 -
Dod04g2833 446 Pfam Dynamin GTPase effector domain 350 442 IPR003130 GO:0003924|GO:0005525
Dod04g2833 446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 144 IPR027417 -
Dod04g2833 446 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 1 136 IPR030381 GO:0005525
Dod04g2833 446 SMART GED_2 349 442 IPR003130 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2833 Dod-Chr4 52311192 52314705 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2833 - - gmx:547855 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2833 04 52311192 52314705 Dod04g2833 04 52311192 52314705 ECH
Dod02g1178 02 14579261 14594168 Dod04g2833 04 52311192 52314705 PCT