Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1178 ATGGAGAACCTAATATCTTTGGTGAACAAAATCCAGAGGGCTTGCACCGCTTTAGGTGACTACGGCGAAGCTACTGCCCTCCCTACTCTCTGGGACTCCCTCCCCGCTATCGCCGTCGTCGGTGGCCAGAGCTCTGGAAAGTCCTCAGTGTTAGAGAGCATTGTTGGCAAGGATTTCTTGCCTCGGGGGTCAGGGATAGTTACTCGGAGGCCTCTTGTGTTGCAGCTTCACAAGAGTGAGGAAGGATCCAGAGAGTATGCAGAGTTTCTTCACCTTCCCAGGAAGAGGTTCACTGATTTTGCTGCTGTGAGGAAGGAGATTCAAGATGAAACTGATAGGGAGACTGGAAAAACCAAGCAGATTTCGAGTGTCCCAATTCATCTTAGTATATATTCTCCTAATGTTGTTAACTTGACACTCATTGATCTTCCTGGCCTTACGAAGGTAGCTGTAGAGGGTCAACCAGATAGTGTTGTGCAAGAGATTGAGGATATGGTTCGCTCCTACATTGAGAAGCCAAACTGTATAATTTTGGCTATCTCACCAGCCAATCAAGATCTTGCAACATCTGATGCAATCAAAATCTCCCGTGAAGTGGATCCCACTGGGGAAAGGACATTTGGAGTCTTGACCAAGATTGATATTATGGATAAGGGTACTGATGCTGTTGAGGTATTGGAAGGGAGATCTTATAGGTTGAAGTATCCTTGGATTGGTGTAGTTAACAGATCACAGGCAGATATTAACAAGAATGTTGACATGATTGCTGCTAGGAGTAGAGAACGTGAATACTTTTCTACTACCTCTGAATATAAACACCTTGCTCATAGAATGGGTTCCGAACATCTAGCAAAGGTGCTTTCAAAGCATTTGGAGGCAGTAATCAAGTCTAAAATTCCAGGCATTCAATCTCTTATCAGTAAAACAATTGCTGAACTTGAAGCTGAACTGAGTCGCTTGGGAAAGCCTATTGCAGCTGATGATGGGGGCAAGTTGTATGCAATCATGGAAATATGCCGCTCATTTGATCAGATATTTAAAGAACATCTTGATGGAGTGCGACCTGGAGGTGATAAAGTTTATAATGTCTTTGACAATCAGCTCCCTGCTGCTTTAAAAAGGTTGCAGTTTGATAAGCAGCTTTCAATGGAAAATATAAGGAAACTCATTACAGAAGCTGATGGATATCAACCTCATCTAATGGCTCCAGAACAAGGATACCGTCGCCTCATTGAATCTTCCCTAATTACTATCAGGGGCCCTGCTGAGGCAGCTGTTGATGCAGTTCATTCCATATTGAAGGACCTGGTTCACAAAGCTATTAGTGAGACTCTGGACTTGAAGCAGTATCCTGGTCTCCGGGCTGAGGTTGGGAACGCAGCTATTGATTCGCTAGGAAAGAATGAGGGAGGAAAGCAAAAAATCAACACTGCAGTTAGTTGA 1443 0.4407 MENLISLVNKIQRACTALGDYGEATALPTLWDSLPAIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQLHKSEEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGKTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSVVQEIEDMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPTGERTFGVLTKIDIMDKGTDAVEVLEGRSYRLKYPWIGVVNRSQADINKNVDMIAARSREREYFSTTSEYKHLAHRMGSEHLAKVLSKHLEAVIKSKIPGIQSLISKTIAELEAELSRLGKPIAADDGGKLYAIMEICRSFDQIFKEHLDGVRPGGDKVYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLMAPEQGYRRLIESSLITIRGPAEAAVDAVHSILKDLVHKAISETLDLKQYPGLRAEVGNAAIDSLGKNEGGKQKINTAVS* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1178 480 Gene3D Dynamin, middle domain 326 478 - -
Dod02g1178 480 Pfam Dynamin central region 221 470 IPR000375 -
Dod02g1178 480 PANTHER DYNAMIN 2 468 IPR022812 -
Dod02g1178 480 Pfam Dynamin family 37 213 IPR045063 -
Dod02g1178 480 CDD DLP_1 33 300 IPR001401 GO:0003924|GO:0005525
Dod02g1178 480 SMART dynamin_3 1 251 IPR001401 GO:0003924|GO:0005525
Dod02g1178 480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 308 IPR027417 -
Dod02g1178 480 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 31 300 IPR030381 GO:0005525
Dod02g1178 480 Gene3D - 1 309 IPR027417 -
Dod02g1178 480 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 60 69 IPR019762 -
Dod02g1178 480 PRINTS Dynamin signature 59 76 IPR022812 -
Dod02g1178 480 PRINTS Dynamin signature 182 200 IPR022812 -
Dod02g1178 480 PRINTS Dynamin signature 224 243 IPR022812 -
Dod02g1178 480 PRINTS Dynamin signature 34 52 IPR022812 -
Dod02g1178 480 PRINTS Dynamin signature 132 149 IPR022812 -
Dod02g1178 480 PRINTS Dynamin signature 201 217 IPR022812 -
Dod02g1178 480 PANTHER DYNAMIN-LIKE PROTEIN 1E 2 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1178 Dod-Chr2 14579261 14594168 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1178 - - gmx:100819043 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1178 02 14579261 14594168 Dod04g2833 04 52311192 52314705 PCT