Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2831 ATGGCCGCGAAAACCGTTCTGGTCACCGGCGGAGCCGGTTACATCGGCAGCCACACTGTTCTCCAGCTCCTCGTCGGCGGTTACAAGGCCGTCATCGTCGACAGCCTGGACAATTCCTCCGAAATCTCCGTCCAAAGAGTCAAGGAGCTCGCCGGGGAATTCGCCGGCAACCTTTCCTTCCACAAGTTAGACCTCCGCGACAGAGCTGGACTTGAGCAAATTTTTGCTTCCACAAAGTTTGATGCTGTCATACATTTTGCTGGACTGAAAGCTGTAGGTGAAAGTGTGCAGGAACCGCTACTCTACTATGACAACAACTTGATTGGTACAATCGTTCTATTTGAAGTCATGGCTGCCCACGGATGCAAGAAGCTTGTGTTCTCTTCTTCAGCCACTGTATATGGTTGGCCAAAGGAGGTCCCATGTACTGAAGAGTTCCCTTTGTCAGCAGCAAATCCCTATGGACGAACCAAGCTTATCATTGAAGAAATTTGTTGTGATATCTACCGTTCAGACCCAGAGTGGAAAATAATATTGTTGAGATACTTCAACCCAGTTGGTGCTCATCCTAGTGGTCGTATTGGTGAGGATCCTCGTGGAATTCCAAACAACCTTATGCCATTTGTTCAGCAAGTAGCAGTTGGCAGACGCCCTGCCCTGACGGTGTTTGGAACTGATTATAAAACAAGTGATGGCACTGGAGTTCGCGATTACATTCATGTTGTTGATTTAGCCGATGGGCATATTGCAGCATTGAATAAACTAGATGATTCTAAAATAGGTTGTGAGGTCTATAACTTGGGAACAGGTAAGGGGACATCAGTCTTGGAGATGGTTAAAGCATTTGAAGAGGCCTCAGGAAAGAAAATTCAACTTGTGATGGCTGATCGGAGACCTGGTGATGCTGAAATTGTTTATGCATCAACAGACAAAGCAGAAAAAGAACTTAACTGGAAGGCAAAATATGGCATTGATGAGATGTGCCGCGATCAATGGAATTGGGCTAGCAAAAATCCTTATGGCTATGGATCTGCAGATTCCACCAATGGATATTGA 1056 0.4602 MAAKTVLVTGGAGYIGSHTVLQLLVGGYKAVIVDSLDNSSEISVQRVKELAGEFAGNLSFHKLDLRDRAGLEQIFASTKFDAVIHFAGLKAVGESVQEPLLYYDNNLIGTIVLFEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAANPYGRTKLIIEEICCDIYRSDPEWKIILLRYFNPVGAHPSGRIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGTDYKTSDGTGVRDYIHVVDLADGHIAALNKLDDSKIGCEVYNLGTGKGTSVLEMVKAFEEASGKKIQLVMADRRPGDAEIVYASTDKAEKELNWKAKYGIDEMCRDQWNWASKNPYGYGSADSTNGY* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2831 351 Pfam GDP-mannose 4,6 dehydratase 7 330 IPR016040 -
Dod04g2831 351 Gene3D - 194 335 - -
Dod04g2831 351 TIGRFAM galE: UDP-glucose 4-epimerase GalE 6 340 IPR005886 GO:0003978|GO:0006012
Dod04g2831 351 CDD UDP_G4E_1_SDR_e 5 334 IPR005886 GO:0003978|GO:0006012
Dod04g2831 351 Gene3D - 6 275 - -
Dod04g2831 351 PANTHER UDP-GLUCOSE 4-EPIMERASE 1 346 - -
Dod04g2831 351 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 341 IPR036291 -
Dod04g2831 351 PANTHER UDP-GLUCOSE 4-EPIMERASE 5 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2831 Dod-Chr4 52301352 52304874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2831 5 319 Miscellaneous Gene Families AT4G00110 27.660 5.44e-22 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2831 K01784 - zju:107429837 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2831 04 52301352 52304874 Dod04g2831 04 52301352 52304874 ECH
Dod02g1177 02 14572466 14577633 Dod04g2831 04 52301352 52304874 PCT