Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1177 ATGGCCTCTCGCGTCAGCATCAACAACGTTACCAACTTCCCTTCCTCTTCCCCATCCTCATCACCCTATTTAAATCATTCTCATCCTTTTCGCAACGTTTCCACTAATCAGAGCCCGCCCTTCTCCCACTCTTCTTCCTCTCGATCTTCCTCTATTAGTTCTGCTATCATGGTTCCTAAAACTGTACTGGTTACCGGTGGCGCCGGTTACATCGGCAGCCACACCGTCCTTCAGCTCCTCCTCGGCGGTTGCAAGACCGTCGTTGTGGACAACCTCGACAATTCCTCCGAGGTTGCTATCCACCGGGTCAAGGAGCTCGCCGGTGAATTCGGCAACAACCTCTTCTTTTACCAGGTAGACCTCCGGGACAGAGCTGCACTCGAGCAACTTTTTGCTTCCACAAAGTTTGATGCTGTCATACATTTTGCTGGACTAAAAGCAGTAGGTGAAAGTGTGCAGAAGCCATTGCTCTACTATAACAACAACTTGATTGGGACAATCACTCTATTGGAAGTAATGGCTGCCCATGGATGCAAGAAGCTTGTGTTCTCATCTTCAGCCACTGTATATGGTTGGCCAAAAGAGGTTCCATGTACTGAAGATTTCCCTCTGTCAGCAATGAATCCATATGGACGAACTAAGCTTACCATTGAAGAAATTTGTCGTGATCTCTACCATGCTGAGTCAGATTGGAAAATTATATTGTTGAGATACTTCAACCCAGTGGGTGCACATCCTAGTGGTTATATTGGGGAGGATCCTCACGGAATTCCAAACAATCTCATGCCATTTGTTCAGCAAGTAGCAGTTGGCAGACGGCCTGCACTGACAGTTTTTGGGACTGATTATAATACAGTTGATGGCACTGGGGTTCGTGATTATATTCACGTTGTTGATTTAGCAGATGGGCACATTGCTGCATTGCTTAAACTAGATGAACCTAATATAGGTTGTGAGGTTTATAACTTGGGAACAGGAAAGGGAACATCAGTTTTGGAGATGGTCAGAGCTTTTGAAAAGGCCTCTGGAAAGGTAATAGCCTAA 1044 0.4598 MASRVSINNVTNFPSSSPSSSPYLNHSHPFRNVSTNQSPPFSHSSSSRSSSISSAIMVPKTVLVTGGAGYIGSHTVLQLLLGGCKTVVVDNLDNSSEVAIHRVKELAGEFGNNLFFYQVDLRDRAALEQLFASTKFDAVIHFAGLKAVGESVQKPLLYYNNNLIGTITLLEVMAAHGCKKLVFSSSATVYGWPKEVPCTEDFPLSAMNPYGRTKLTIEEICRDLYHAESDWKIILLRYFNPVGAHPSGYIGEDPHGIPNNLMPFVQQVAVGRRPALTVFGTDYNTVDGTGVRDYIHVVDLADGHIAALLKLDEPNIGCEVYNLGTGKGTSVLEMVRAFEKASGKVIA* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1177 347 TIGRFAM galE: UDP-glucose 4-epimerase GalE 62 346 IPR005886 GO:0003978|GO:0006012
Dod02g1177 347 CDD UDP_G4E_1_SDR_e 61 346 IPR005886 GO:0003978|GO:0006012
Dod02g1177 347 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 57 344 IPR036291 -
Dod02g1177 347 MobiDBLite consensus disorder prediction 1 49 - -
Dod02g1177 347 Pfam GDP-mannose 4,6 dehydratase 63 301 IPR016040 -
Dod02g1177 347 Gene3D - 243 346 - -
Dod02g1177 347 PANTHER UDP-GLUCOSE 4-EPIMERASE 60 346 - -
Dod02g1177 347 Gene3D - 62 324 - -
Dod02g1177 347 PANTHER UDP-GLUCOSE 4-EPIMERASE 1 60 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1177 Dod-Chr2 14572466 14577633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1177 61 340 Miscellaneous Gene Families AT4G00110 28.283 4.04e-20 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1177 K01784 - gmx:100792137 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1177 02 14572466 14577633 Dod04g2831 04 52301352 52304874 PCT