Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2796 ATGGATGAAGATTTGGTTAATGAGGCAGTGAGATTGGAGGTTGTTGCTGAGGGTGCGCAAAACCAGACCAATGATGAGGAACCCTCACTAAACCCTGAGTGCCACAAAATATTAAGGCCCCAAGATAACCTTAATGACTTCTCCCGTGTCCCACCCCGAGAATATAATGCCATTAGACAGGATGCTACGTCACAAGTTCTGCAGCCGAGTCATTTTTCGGATGATCCTGGTGACATGGTTGAAGAATTGACAGTGAGAAGTTACGAGGGTTCACGCTTAGAAATTGGTACATCAAGCAATCGAGGGTCTTTGTGTAATAGGCAGAAGCAATGGCAGCTAGCTAGTGATGCAGGAACGGGAAATTCAGTAGTTGATACTGAGTGCAGAAATAGTGATCAAGCTATATCTGGTATTTCGGAGGATTTAAGGTCCACAACTTCCCCTGAGATACTAGCTGGAAAGTCAATCAGTGATGATCAGAGCAATGTCACGGAACACTTGACAAATGTTGAACACAAAGCTGAACTTAAAGACAATCAAGGCGATGCTCATGGAGGAGTACGGACAAAGATTATATCCAAGTCAGGATCTTCTGAGTATTTTATTAAAAATACTTTAAAGGAAAAGGGTATTGTATGCAAAGGTCCATCTTCTAATGGCTTATCTGTTGAGTCTAAAGATCATAATCTGATGAAGGTTGGAAATGGTACTCAGATCGATTCTAGTGTATCAATGAGCTCTAGGTCAGAGACTTCAAAGCCTCCTTTTAATGCTCCATTGCCAAGTTGTGGTGGGACTGACTCTTATGGTGTGACTTTGAGAGAATGGTTGAAAGCTGGTCAACACAAAAGAAGCAAAGGAGAGCGCTTAAAGATATTCATAAAGATTGTGGATTTGGTGGATGGTTCACACTCTCAGGGATTTGCACTGCACAACCTGACCCCATCTTATATTAAATTGTTACCATCGAACCAGGTTATGTACCTTGGGTTACAGAAACAAATGTTAGATAGCGGTGCAAATTCTGAAGTTCTTAAGTTAGAGAATTCCTTTATCAGAAAAAGAATGTCAGAGCAGGTATTATCTCCCTCTCAGCATGTGTGGTCAAAGAAACAAAAATTTATTGAGAATGTGGAAGTTGTTGGTGATCGGAGAAAGTGCCCTCCAAGGTCTGATTTGCATCTTCAAATTTCTAGTGAAAGCAAAGTAGATTTCATTGGATCACAAGATTATTGCAATCAATATAAGGATATCCGATTTTCAAACAATAATATTTTGAGAATGTCTAGCAACCCTTGCACATCTAATGAAAGCCAATCAAAATTGACTTCTTTAAGTGAAAGATGGGAAGATAAGTGGTATACAAGTCCTGAGGGAGGTTGCACGACATCATCAAATATCTACTGTCTGGGTGTTCTCTTTTTTGAGTTACTTGGCCATTTTGATTCTGAAAGAGCCCATATTGCAGCTATGTCTAATCTTCATCATAGGATTCTGCCTCAAGTTTTCCTGTCAGAAAATCCTGAGGAAGCCAGACTATGCCTTTGGCTGCTGCATCCTGAGCCAACATCACGTCCAACAACAAGGGAGATCCTACAATCTGAAGTGATTAATGGAATTCCGGAGGTTTGTATTGAGGAATTATCATTAAAGATTGACCAAGAGGATGCAGAATCAGAATTGTTATTGCATTTCCTGCTATTGTTAAAAGAGCGAAAGAACAAGGTTGCCTTCAAATTGGAAGACAAAGTCAGATTCTTGGAATCAGATATAGAAGCGGTGGAGAGGAGATATAGCTCAAGAAAATCATTGGTTTCCTCTAGCTTGCATAATGACATGTCTTGTCAAAATGAGAGTGCATCTCTTCACAAAGAACCTTCAAGTTCAGAAACAACACTGCCAGTTTGCCCAATCTCTAATGCAAACAAAACAGTAATGAGAAATATGCGTCGGCTTGAAAGTGCTTACTTTTCCATGAGATACAAAGTTCAGATTCCACAAACAGATGCTGCAACTCGCCCAGATAAAGATATACTGAGATATCGTGAGAATTGGTCTGTGGCCCAAAATGACAAGGAACAACATAAAACAACAGATACCATAGGAGCCTTCTTTGATGGCTTTTGCAAGTATGCACGTTATAGCAAGTTTGAAGTGCGGGGTGTACTGAGAAATTCAGATTTTAACTATCTTGGAAATGTAATTAGCTCTCTGAGCTTTGATAGGGATGAAGAGTACCTTGCAGCAGCTGGGTTGTCAAAGAAATTAAAGATTTTTGAGTTTAGTAGACTTTTCCATGATGCTGTTGATATCCATTATCCTGTAGTTGAAATGTCAAACGGATCAAAGCTCAGTTGTGTTTGTTGGAATAGCTACATCAAGAATTATCTTGCCTCCACAGACTATGATGGTGTTGTTAAGGTTTGTATGTCTTGCACATGA 2442 0.3984 MDEDLVNEAVRLEVVAEGAQNQTNDEEPSLNPECHKILRPQDNLNDFSRVPPREYNAIRQDATSQVLQPSHFSDDPGDMVEELTVRSYEGSRLEIGTSSNRGSLCNRQKQWQLASDAGTGNSVVDTECRNSDQAISGISEDLRSTTSPEILAGKSISDDQSNVTEHLTNVEHKAELKDNQGDAHGGVRTKIISKSGSSEYFIKNTLKEKGIVCKGPSSNGLSVESKDHNLMKVGNGTQIDSSVSMSSRSETSKPPFNAPLPSCGGTDSYGVTLREWLKAGQHKRSKGERLKIFIKIVDLVDGSHSQGFALHNLTPSYIKLLPSNQVMYLGLQKQMLDSGANSEVLKLENSFIRKRMSEQVLSPSQHVWSKKQKFIENVEVVGDRRKCPPRSDLHLQISSESKVDFIGSQDYCNQYKDIRFSNNNILRMSSNPCTSNESQSKLTSLSERWEDKWYTSPEGGCTTSSNIYCLGVLFFELLGHFDSERAHIAAMSNLHHRILPQVFLSENPEEARLCLWLLHPEPTSRPTTREILQSEVINGIPEVCIEELSLKIDQEDAESELLLHFLLLLKERKNKVAFKLEDKVRFLESDIEAVERRYSSRKSLVSSSLHNDMSCQNESASLHKEPSSSETTLPVCPISNANKTVMRNMRRLESAYFSMRYKVQIPQTDAATRPDKDILRYRENWSVAQNDKEQHKTTDTIGAFFDGFCKYARYSKFEVRGVLRNSDFNYLGNVISSLSFDRDEEYLAAAGLSKKLKIFEFSRLFHDAVDIHYPVVEMSNGSKLSCVCWNSYIKNYLASTDYDGVVKVCMSCT* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2796 813 MobiDBLite consensus disorder prediction 232 261 - -
Dod04g2796 813 SUPERFAMILY Protein kinase-like (PK-like) 269 548 IPR011009 -
Dod04g2796 813 MobiDBLite consensus disorder prediction 232 256 - -
Dod04g2796 813 PANTHER PROTEIN SPA1-RELATED 2 9 808 IPR044630 GO:0009640
Dod04g2796 813 SUPERFAMILY WD40 repeat-like 733 808 IPR036322 GO:0005515
Dod04g2796 813 Gene3D Transferase(Phosphotransferase) domain 1 270 544 - -
Dod04g2796 813 Gene3D - 704 811 IPR015943 GO:0005515
Dod04g2796 813 Coils Coil 577 597 - -
Dod04g2796 813 PANTHER PROTEIN SPA1-RELATED 2 9 808 - -
Dod04g2796 813 MobiDBLite consensus disorder prediction 615 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2796 Dod-Chr4 52000651 52005577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2796 K16240 - gmx:100776980 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2796 04 52000651 52005577 Dod04g2796 04 52000651 52005577 ECH
Dod02g1152 02 14293513 14301079 Dod04g2796 04 52000651 52005577 PCT