Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1152 ATGGATGAAGAATTTGCTGGTGGGGAAACCCACTTGGAGGTTGCTGAGGATTCACAGCGCCAGAAAAGAGATGATGAGTATGCACTAAACCCAAAAATATTGAAATCTCAGGAAACCCTTATTGCTGCTAAGGAGGGATATGATGATATTCGACAAGGTAAAAACGTTGTTGAAGCCATCAGCAGCCATGCCGATACGTCACAACATCCACATGAAAGCCTCTTTATGGATGATGCTGCTGTCATGGTTGAAGAATTGACCGTGAAAAGTTACAATGGTTCAAGCTTAGATGTTGGGACATCGAATAACCGGCAGCAGGTATATTACGGGCAGAACCAGTGGCAGAATCTTTATCAGGTGGCGAGTGGTTCGGGGATTGGAAGTTCACTAAGTGATATTGGGCACAGAAGCAGTGTCCAGACTACATCTAGTGCTAGGGAGGATGTTGGATCCACGTCTTTCCCGGAGCTGTTAGCTAGGAAATCACTCAGTGATGGTCAGAGCAATGTCATGGAACACCTGGCTGCTGCTGAAAATAAAGAGAGCGCAGCTGATGTTCATGGACGAGTGCGGACAAAAATTATATCCAAATCGGGGTTTGCTGAGTATTTTATTAAAAGTACATTGAAGGGAAAGGGTATTGTTCGTAAAGGTCCATCTTCTGATGGATTCTGCATTCAGTCTAGAGATAAATTTCAGATGAAGACTGGCACTGGTACAGATCAGAATCAGATGAGGACCGGCATTGGTACTGATCAAAATCAGGAGAAGACTGGCTGTGGTACTCAGTGGAACTCTAATTCATCAGTGAGCTATGGTTCCATAACTGCAAAGTGTCCTTCTTATGGTGGTGCCGTGTCTAGATCAGCTGGGTTAGACTGTGATGGTGTGAGTTTGAGGGAATGGTTGAAATCTGGGCACCGCAAAGCAAGCAAGGTGGAGTGTTTGAATATATTTAGAAAGATTGTGGATTTGGTGAATGACTCTCACTCCCTGGGAGTTGCATTGAACAACCTGTGTCCATCTTATATAAAATTGTTACCATCATACCAGCTCATGCTCCTTGGGTTACCTATGCAAAAACAGATGTTAGATAGTGTCGTAAATTCTGAGTCTGAAGTTCTTCAAGTAGATAATTCTTTTGTTAGAAAAAGGTTGTCGGAGCAAGCAACATTTCCTTCTCTTGACATGGGGTCAAAGAAACAAAAATTTAATGAAAATATGATATTTTCTGGGAGTGACTCATGTCTTGAAACTGCTAGTGATAGGAAAGTCCATACAGTTGGATCACGAGTTTATTGCAATGAATATGAAGAAGGTATCCAATTTTCTAAGTATAATATTGGGAGAATATCTAGCATCCTACGTGTATCCAATGCAGGTCAGTTGCCATGGACTTCTTCATGTGAAAGATTGGAAGATAAGTGGTATGCAAGTCCTGAGGGAGGTTGCACAACATCATCAAATATCTACTGCCTTGGTGTTCTCCTTTTCGAGTTACTCGGCCATTTTGACTCTGAAAGAGCACATATTGCAGCAATGTCTGATCTTCGTAATAGGATTCTTCCTTCTGTTTTCCTATCGGAAAATCCTAAGGAAGCTGGCTTTTGTCTTTGGCTGCTGCATCCTGATCCATCATCACGTCCAACAACAAGGGAAATCCTACAATCTGAAGTGATTAATGGATTGCAGGAGTTGAATAGTGAGGAATTGTCATCAAGTATTGAGCAAGATGATGCAGAATCAGAATTGTTATTGCATTTCCTAGTATCATTGAAAGAGCATAAGCAGATGGATGCCTCCAAATTGGCAGAAGGAATCAGGTGGTTGGAATCAGATATTGAAGAGGTGGAGAGGAGGCATGGCTCACAAAATTCCTTGATTTCCTCTGCCTCGCCGAATGATTACTCTTGCCACAAAGAGATGAAAAGGGAACCTTTGAGTTTAGAAATGCTACCCTCAATATCCCGAATTTCTAATGCAAATGAATTGAGATTGTTGAGAAATATATGTCATCTCGAAAGTGCTTATTTTTCCATGAGATCCAAAGTTCAGCCCTCTGAAACAGATGATACAGCTCACCCTGATAAAGATATACTAAAAAATCATGAGGACTGCTACGTGACTCAGAAAGGTGAGGAGCAACCTAAAAGGAAAGATAGTTTAGGAACCTTCTTTGATGGTTTGTGCAAGTATGCACGTTATAGCAAATTTGAAGTACGAGGTTTACTAAGAAATGCAGATTTTAACAATCTTGCAAATGTAATTTGCTCTCTGGGCTTTGATCGGGATGAAGATTACTTTGCTTCTGCTGGGATATCCAAGAAAATAAAAATTTTTGATTTTAATGCACTTTGCAATGACTCTGTTGATATCCATTATCCTGTAGTTGAGATGTCAAACAGTTCAAAGCTCAGCTGTGTTTGCTGGAATAACTATATAAAGAACTATCTTGCCTCCACAGACTATGATGGTGTAGTGAAGTTATGGGATGCTAGTACAGGTCAGGAGTTTTGTCAATTCATTGAACATGAAAAGAGGGCTTGGTCTGTTGACTTTTCTCCAGTCTGCCCTACAAAATTGGCCAGTGGGAGCGATGATTGTTCTGTCAAGCTGTGGAACATCAGTGAGAGAAACAGTTTAGGTACAATCAGGAATGTTGCTAACGTCTGCTGTGTTCAATTCTCTGCCCATTCTTCTAACTTGCTGGCCTTTGGATCTGCTGATTACTCAACGTATTGCTATGATCTTCGAAATCTTAGAAGTCCCTGGTGTGTATTGGCTGGACATCGTAAAGCTGTAAGCTTTGTCAAATTCTTAGACTCTGAAACACTTGTTTCTGCATCTACTGATAATACGTTGAAGATCTGGGATCTCAATAAAACTACACCTGTGGCTGCATCTGGTAGTGCTTGCAGCCTCACGCTGTCAGGACATACTAATGAGAAGAATTTTGTGGGTTTATCAGTTGCTGATGGATATATAGCATGTGGTTCAGAAACAAATGAGGTTTACTCCTACCATAGATCGCTTCCAATGCCGATCACTTCGCACAAGTTTGGGTCCATTGATCCCATCTCTGGTAAAGACACTGATGATGACAATGGTCAGTTTGTTTCGAGTGTGTGCTGGAGAGAGAAATCGGACATGCTTATTGCAGCCAACTCAAGTGGATGTATAAAAGTGTTGCAGATGATTTAA 3201 0.4124 MDEEFAGGETHLEVAEDSQRQKRDDEYALNPKILKSQETLIAAKEGYDDIRQGKNVVEAISSHADTSQHPHESLFMDDAAVMVEELTVKSYNGSSLDVGTSNNRQQVYYGQNQWQNLYQVASGSGIGSSLSDIGHRSSVQTTSSAREDVGSTSFPELLARKSLSDGQSNVMEHLAAAENKESAADVHGRVRTKIISKSGFAEYFIKSTLKGKGIVRKGPSSDGFCIQSRDKFQMKTGTGTDQNQMRTGIGTDQNQEKTGCGTQWNSNSSVSYGSITAKCPSYGGAVSRSAGLDCDGVSLREWLKSGHRKASKVECLNIFRKIVDLVNDSHSLGVALNNLCPSYIKLLPSYQLMLLGLPMQKQMLDSVVNSESEVLQVDNSFVRKRLSEQATFPSLDMGSKKQKFNENMIFSGSDSCLETASDRKVHTVGSRVYCNEYEEGIQFSKYNIGRISSILRVSNAGQLPWTSSCERLEDKWYASPEGGCTTSSNIYCLGVLLFELLGHFDSERAHIAAMSDLRNRILPSVFLSENPKEAGFCLWLLHPDPSSRPTTREILQSEVINGLQELNSEELSSSIEQDDAESELLLHFLVSLKEHKQMDASKLAEGIRWLESDIEEVERRHGSQNSLISSASPNDYSCHKEMKREPLSLEMLPSISRISNANELRLLRNICHLESAYFSMRSKVQPSETDDTAHPDKDILKNHEDCYVTQKGEEQPKRKDSLGTFFDGLCKYARYSKFEVRGLLRNADFNNLANVICSLGFDRDEDYFASAGISKKIKIFDFNALCNDSVDIHYPVVEMSNSSKLSCVCWNNYIKNYLASTDYDGVVKLWDASTGQEFCQFIEHEKRAWSVDFSPVCPTKLASGSDDCSVKLWNISERNSLGTIRNVANVCCVQFSAHSSNLLAFGSADYSTYCYDLRNLRSPWCVLAGHRKAVSFVKFLDSETLVSASTDNTLKIWDLNKTTPVAASGSACSLTLSGHTNEKNFVGLSVADGYIACGSETNEVYSYHRSLPMPITSHKFGSIDPISGKDTDDDNGQFVSSVCWREKSDMLIAANSSGCIKVLQMI* 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1152 1066 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 927 960 - -
Dod02g1152 1066 SUPERFAMILY Protein kinase-like (PK-like) 294 567 IPR011009 -
Dod02g1152 1066 PANTHER PROTEIN SPA1-RELATED 2 1 1066 - -
Dod02g1152 1066 ProSitePatterns Trp-Asp (WD) repeats signature. 945 959 IPR019775 -
Dod02g1152 1066 ProSiteProfiles Trp-Asp (WD) repeats profile. 798 840 IPR001680 GO:0005515
Dod02g1152 1066 PANTHER PROTEIN SPA1-RELATED 2 1 1066 IPR044630 GO:0009640
Dod02g1152 1066 Pfam WD domain, G-beta repeat 840 874 IPR001680 GO:0005515
Dod02g1152 1066 Pfam WD domain, G-beta repeat 926 958 IPR001680 GO:0005515
Dod02g1152 1066 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 841 876 - -
Dod02g1152 1066 SUPERFAMILY WD40 repeat-like 753 1063 IPR036322 GO:0005515
Dod02g1152 1066 MobiDBLite consensus disorder prediction 236 260 - -
Dod02g1152 1066 Gene3D Transferase(Phosphotransferase) domain 1 294 573 - -
Dod02g1152 1066 MobiDBLite consensus disorder prediction 7 26 - -
Dod02g1152 1066 SMART WD40_4 834 874 IPR001680 GO:0005515
Dod02g1152 1066 SMART WD40_4 742 781 IPR001680 GO:0005515
Dod02g1152 1066 SMART WD40_4 792 831 IPR001680 GO:0005515
Dod02g1152 1066 SMART WD40_4 920 958 IPR001680 GO:0005515
Dod02g1152 1066 SMART WD40_4 1025 1064 IPR001680 GO:0005515
Dod02g1152 1066 SMART WD40_4 969 1008 IPR001680 GO:0005515
Dod02g1152 1066 SMART WD40_4 877 916 IPR001680 GO:0005515
Dod02g1152 1066 MobiDBLite consensus disorder prediction 1 26 - -
Dod02g1152 1066 ProSitePatterns Trp-Asp (WD) repeats signature. 861 875 IPR019775 -
Dod02g1152 1066 Gene3D - 725 1066 IPR015943 GO:0005515
Dod02g1152 1066 ProSiteProfiles Trp-Asp (WD) repeats profile. 927 967 IPR001680 GO:0005515
Dod02g1152 1066 ProSiteProfiles Trp-Asp (WD) repeats profile. 841 883 IPR001680 GO:0005515
Dod02g1152 1066 ProSitePatterns Trp-Asp (WD) repeats signature. 818 832 IPR019775 -
Dod02g1152 1066 PRINTS G protein beta WD-40 repeat signature 818 832 IPR020472 -
Dod02g1152 1066 PRINTS G protein beta WD-40 repeat signature 945 959 IPR020472 -
Dod02g1152 1066 PRINTS G protein beta WD-40 repeat signature 861 875 IPR020472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1152 Dod-Chr2 14293513 14301079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1152 799 959 Miscellaneous Gene Families AT5G08390 24.848 2.29e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1152 K16240 - gmx:100778303 1648.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1152 02 14293513 14301079 Dod04g2796 04 52000651 52005577 PCT