Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2690 ATGGCGTTGCAAGAGAAACTAGAGAGATTCAAGAAGCAGCAAGAAAAGTGTCAGTCAACGTTGTCAAGCATCGCAGCAAGCAAGGCCTCAACCCAGCACAAATCATCATCTTCTTCTTCTGCTTCTTCAGCCAATGGAATTGGAAGGAACCAAGCAGCAGCAGCCCCTGCTGTCAAATTCTCCAACGACACGGAGAGGCTCCAGCATATTAACAGCATACGCAAAGCCCCCGTTGGTGCTCAGATGAAGCGTGTTATCCATCTCCTCTTTGAGACCCGACAGGCTTTGACACCAGAGCAAATAAATGAAGCATGCTATGTTGACATGAAGGCTAACAAAGATGTTTTTGATAATCTGAGGAAAAACCCAAAAGTAAACTATGATGGCCAACGTTTCTCTTACAAGTCAAAGCATGACCTTAAGGACAGAACTCAGCTTCTTTACCTGATACGTAAGTTTACAGAGGGCATTGCTGTTATCGACCTAAAGGATGCTTACCCAACTGTGATGGAAGACTTGCAGGCTTTGAAAGCTGCAGGGCAGATTTGGCTGCTGTCGAATTTTGATTCACAGGAGGACATTGCCTACCCTAATGACCCCAGAGTGCCCATTAAGGTGGATGAGGACATAAAGCAGCTTTTTCGGAGTATTGAATTGCCTCGTGACATGATAGATATAGAGAAGGATCTTCAAAAGAATGGAATGAAGCCTGCTACCAACACTGCTAGGAGGAGGAGTTCAGCACAAATTCAAGGCCTTTCTTCCAAGCCAAAGGTTAAGAAGCCTAAGAATAATGTAATCAACAGCAGGACCAAGCTGACCAATGCCCATCTTCCGGAGCTTTTCCAGAAACTGAACAATTCCTGA 867 0.4498 MALQEKLERFKKQQEKCQSTLSSIAASKASTQHKSSSSSSASSANGIGRNQAAAAPAVKFSNDTERLQHINSIRKAPVGAQMKRVIHLLFETRQALTPEQINEACYVDMKANKDVFDNLRKNPKVNYDGQRFSYKSKHDLKDRTQLLYLIRKFTEGIAVIDLKDAYPTVMEDLQALKAAGQIWLLSNFDSQEDIAYPNDPRVPIKVDEDIKQLFRSIELPRDMIDIEKDLQKNGMKPATNTARRRSSAQIQGLSSKPKVKKPKNNVINSRTKLTNAHLPELFQKLNNS* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2690 288 PANTHER BNAA02G21830D PROTEIN 1 287 - -
Dod04g2690 288 MobiDBLite consensus disorder prediction 234 254 - -
Dod04g2690 288 Pfam TFIIE beta subunit core domain 80 139 IPR003166 GO:0006367
Dod04g2690 288 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 66 141 IPR003166 GO:0006367
Dod04g2690 288 MobiDBLite consensus disorder prediction 232 263 - -
Dod04g2690 288 PIRSF TFIIE-beta 1 286 IPR016656 GO:0005673|GO:0006367
Dod04g2690 288 MobiDBLite consensus disorder prediction 21 48 - -
Dod04g2690 288 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 287 IPR016656 GO:0005673|GO:0006367
Dod04g2690 288 Pfam TFA2 Winged helix domain 2 141 198 IPR040501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2690 Dod-Chr4 50867551 50870538 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2690 K03137 - gmx:100802433 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1078 02 13455608 13459735 Dod04g2690 04 50867551 50870538 PCT