Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1078 ATGTTTGATTTTGACATCATCTCCCTGTTTCCAACTCACAATATTCCAAAATCTCTTGAAAATCTCACTCTGATAGAATTTGTTTCGATCGACCAATGTTCTCTTGATCGTGCAATCTATCAAACAAATAAAACAATATATATAACAGATAAAATAAAAAAGAAAAAAATGGAGTGCTCTCTCTTTTACCCCAATTTTGATTTGGCATATTCTGATTGTCAGATGGCGTTGCAAGAGAAGCTTGACAGGTTCAAGAAGCAGCAAGCCAAGTGCCAGTCAACCCTATCGAGCATCGCAGCATCAAAGGCTGCAACCCAAAAACCTAATGCTCCCGTAGCAGCTGCTACGGCTTCTCCGGCACCACCTGCTATCAAATTCTCCAATGACACGGAGAGGCTTCAACATATCAACAGTATCCGCAAAGCCCCCGTAGGGGCTCAGATGAAGCGTGTTATTGATCTCCTCTTTGAGACACGGCAGGCTTTAACACCAGAGCAGATAAATGAAGCTTGCTATGTGGATATGAGGGCTAACAAAGATGTTTTTGACAATATGAGGAAAAACCCAAAAGTAAAATTTGATGGGGAGCGATTCTCTTACAAGTCAAAGCACGACCTTAGGGACAAAAATCAGCTGCTTTACCTTATACGCAAGTTTCCAGAGGGCATTGCCATTATTGACCTCAAGGATGCTTACCCAACTGTGATGGAGGACTTGCAGGCTTTGAAAGCTGCAGGGCAGATTTGGCTGCTGTCCAATTTTGATTCACAGGAAGATATCGCTTACCCTAATGACCCCAGAGTGCCCATTAAGGTAGATGATGACCTAAAACAGCTTTTTCGTGGGATTGAATTGCCTCGTGATATGATTGATATTGAGAAGGATCTCCAAAAGAATGGAATGAAGCCTGCTACTAACACTGCAAAGAGGAGAAGTGCAGCGCAAATGGAAGGCATTTCTTCCAAGCCCAAGTCTAAGCCTAAGAAGAGTGAAATCAGCAAGAGGACTAAGCTGACTAATGCCCATCTTCCTGAGCTTTTTCAGCACCTGAAGAATTCCTGA 1062 0.4275 MFDFDIISLFPTHNIPKSLENLTLIEFVSIDQCSLDRAIYQTNKTIYITDKIKKKKMECSLFYPNFDLAYSDCQMALQEKLDRFKKQQAKCQSTLSSIAASKAATQKPNAPVAAATASPAPPAIKFSNDTERLQHINSIRKAPVGAQMKRVIDLLFETRQALTPEQINEACYVDMRANKDVFDNMRKNPKVKFDGERFSYKSKHDLRDKNQLLYLIRKFPEGIAIIDLKDAYPTVMEDLQALKAAGQIWLLSNFDSQEDIAYPNDPRVPIKVDDDLKQLFRGIELPRDMIDIEKDLQKNGMKPATNTAKRRSAAQMEGISSKPKSKPKKSEISKRTKLTNAHLPELFQHLKNS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1078 353 MobiDBLite consensus disorder prediction 300 314 - -
Dod02g1078 353 Pfam TFIIE beta subunit core domain 146 205 IPR003166 GO:0006367
Dod02g1078 353 MobiDBLite consensus disorder prediction 295 353 - -
Dod02g1078 353 Pfam TFA2 Winged helix domain 2 207 264 IPR040501 -
Dod02g1078 353 PANTHER BNAA02G21830D PROTEIN 75 351 - -
Dod02g1078 353 MobiDBLite consensus disorder prediction 322 338 - -
Dod02g1078 353 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 132 207 IPR003166 GO:0006367
Dod02g1078 353 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 75 351 IPR016656 GO:0005673|GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1078 Dod-Chr2 13455608 13459735 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1078 K03137 - gmx:100802433 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1078 02 13455608 13459735 Dod02g1078 02 13455608 13459735 ECH
Dod02g1078 02 13455608 13459735 Dod04g2690 04 50867551 50870538 PCT