Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2687 ATGACCCCCTTCTCAATCTCTTCCTCCTCCACTACCTCCTCCTCAATTCTCACTCTCATCATCACTCTCTGCTTCACCTCTGCCTATGCAGCAACGTTTGTCATCACAAACCAATGCTCCTCAACTGTCTGGGCCGCAGCTGTGCCTGTCGGCGGTGGCATGCGGCTTAACCGGGGCCAGACCTGGACCATTAACGTCGCTGCCGGTACCAAAGGGGCCCGCATTTGGGCCCGAACGGGCTGCTCCTTCGACGGCTCGGGCCGGGGTCATTGCCAGACCGGAGACTGCGGCGGTCTCCTCCGGTGCACGGCCTACGGTACCCCTCCCAACACCCTCGCGGAATTCGCGCTGAACCAGTTCAACAACCTTGACTTCTTCGACATCTCATTAGTGGACGGGTTCAATGTTCCCATGGACTTTAGCCCAACCTCGAATGGGTGCACCCGCGGGATAAGGTGCGCTGCTGACATCAATGGGCAGTGCCCCAATGAGCTTAGGACTCAAGGGGGATGCAACAACCCTTGCACTGTGTTCAAAACCAACGAGTATTGCTGCACTTCGGGTAGCTGTGGGCCCACCACTTTCTCCAAGTTCTTCAAGGACAGGTGCCCCACTTCTTATAGTTACCCCAAGGATGATAGCACAAGCACGTTTACTTGCCCTGGGGGAACCAACTACAAGGTTGTCTTTTGCCCTTGA 699 0.5637 MTPFSISSSSTTSSSILTLIITLCFTSAYAATFVITNQCSSTVWAAAVPVGGGMRLNRGQTWTINVAAGTKGARIWARTGCSFDGSGRGHCQTGDCGGLLRCTAYGTPPNTLAEFALNQFNNLDFFDISLVDGFNVPMDFSPTSNGCTRGIRCAADINGQCPNELRTQGGCNNPCTVFKTNEYCCTSGSCGPTTFSKFFKDRCPTSYSYPKDDSTSTFTCPGGTNYKVVFCP* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2687 232 Gene3D Thaumatin 31 232 IPR037176 -
Dod04g2687 232 ProSiteProfiles Thaumatin family profile. 30 232 IPR001938 -
Dod04g2687 232 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
Dod04g2687 232 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Dod04g2687 232 PRINTS Pathogenesis-related protein signature 52 61 IPR001938 -
Dod04g2687 232 PRINTS Pathogenesis-related protein signature 124 140 IPR001938 -
Dod04g2687 232 PRINTS Pathogenesis-related protein signature 222 231 IPR001938 -
Dod04g2687 232 PRINTS Pathogenesis-related protein signature 32 44 IPR001938 -
Dod04g2687 232 CDD TLP-P 33 232 - -
Dod04g2687 232 ProSitePatterns Thaumatin family signature. 87 102 IPR017949 -
Dod04g2687 232 SUPERFAMILY Osmotin, thaumatin-like protein 30 232 IPR037176 -
Dod04g2687 232 PANTHER THAUMATIN-RELATED 16 232 - -
Dod04g2687 232 PIRSF PR5 1 232 IPR001938 -
Dod04g2687 232 Pfam Thaumatin family 37 232 IPR001938 -
Dod04g2687 232 PANTHER OS03G0233200 PROTEIN 16 232 IPR001938 -
Dod04g2687 232 SMART tha2 33 232 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2687 Dod-Chr4 50851925 50852897 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2687 13 232 Receptor kinase-like Gene Family AT5G38280 35.628 4.28e-41 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2687 - - jre:108997169 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1076 02 13432805 13433143 Dod04g2687 04 50851925 50852897 PCT