Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1076 ATGGACTTCTACCCTGTGAATGGCGCGTGTCACAAGATCAGCTGCACCGCTGATATTAATGGACAGTGCCCTAACGAGTTGAGGACGCAGGGTGGTTGTAACAACCCGTGCACGGTGTTCAAGACCAATGAGTATTGCTGCACCAATGGCCAAGGGAGCTGTGGACCCACGGACTTGTCAAGGTTCTTTAAAGATAGGTGCCACGATGCTTACAGCTACCCTCAGGATGACCCAACGAGCACTTTCACTTGCCCCGCTGGGTCTAACTACAGGGTTGTGTTCTGTCCTTTGGGGTATCCTCATGTTACCCTTCAGATGCCTGGAAGTTACGAGCAATGA 339 0.5162 MDFYPVNGACHKISCTADINGQCPNELRTQGGCNNPCTVFKTNEYCCTNGQGSCGPTDLSRFFKDRCHDAYSYPQDDPTSTFTCPAGSNYRVVFCPLGYPHVTLQMPGSYEQ* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1076 112 PANTHER PATHOGENESIS-RELATED PROTEIN R MINOR FORM 1 96 - -
Dod02g1076 112 Gene3D Thaumatin 1 96 IPR037176 -
Dod02g1076 112 ProSiteProfiles Thaumatin family profile. 1 96 IPR001938 -
Dod02g1076 112 SUPERFAMILY Osmotin, thaumatin-like protein 1 96 IPR037176 -
Dod02g1076 112 Pfam Thaumatin family 7 96 IPR001938 -
Dod02g1076 112 PANTHER OS03G0233200 PROTEIN 1 96 IPR001938 -
Dod02g1076 112 PIRSF PR5 1 109 IPR001938 -
Dod02g1076 112 SMART tha2 1 96 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1076 Dod-Chr2 13432805 13433143 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1076 5 103 Receptor kinase-like Gene Family AT4G18250 37.383 3.54e-18 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1076 - - gmx:100240704 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1076 02 13432805 13433143 Dod02g1076 02 13432805 13433143 ECH
Dod02g1076 02 13432805 13433143 Dod04g2687 04 50851925 50852897 PCT