Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2686 ATGGCCATCACGCATAGCCTCTCCATCTTCCTGATCATCGCCACAACATACCTCGCCGCCGCCAGGGCAGCAAGGTTCGACATCACGAACCGATGCACCTACACGGTGTGGGCCGCGGCCGTGCCCACCGGCGGCGGCAAGCAGCTCAACACTGGCGACACGTGGTCCATCGACGTTGCCTCCGGAACCACCGGAGGACGCATATGGGCCCGAACCAACTGCAACTTCGATCAGTCAGGCAACGGCCACTGCCAGACCGGTGACTGCGGGGGCCGTCTACAGTGCACAGAATACGGTACACCACCCAACACCCTCGCCGAGTTCGCCCTCAACCAATACAACAACTTGGACTTCTACGACATCTCCCTCGTTGACGGGTTCAATGTTCCCCTGGAGTTCAGCCCCACATCGAGCGGGTGCAGCCGCTCGATCAACTGCACCGCCGACATCATCGGACAGTGTCCTAGCCAGCTCAAGACGGATGGCGGGTGCAACAACCCTTGTACGGTGTTCAAGACGGACGAGTACTGTTGCAACTCTGGTAGCTGTGAGCCCACTGATTATTCAAAGTATTTCAAGGAAAGGTGCCCTGATGCTTACAGTTACCCAAAGGATGACCAAACAAGCACGTTTACTTGCCCCGGGGGAACCAACTATAGGGTTGTGTTTTGTCCTCGAGCTGATTGA 687 0.5735 MAITHSLSIFLIIATTYLAAARAARFDITNRCTYTVWAAAVPTGGGKQLNTGDTWSIDVASGTTGGRIWARTNCNFDQSGNGHCQTGDCGGRLQCTEYGTPPNTLAEFALNQYNNLDFYDISLVDGFNVPLEFSPTSSGCSRSINCTADIIGQCPSQLKTDGGCNNPCTVFKTDEYCCNSGSCEPTDYSKYFKERCPDAYSYPKDDQTSTFTCPGGTNYRVVFCPRAD* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2686 228 ProSitePatterns Thaumatin family signature. 80 95 IPR017949 -
Dod04g2686 228 Gene3D Thaumatin 24 225 IPR037176 -
Dod04g2686 228 PANTHER OS03G0233200 PROTEIN 7 225 IPR001938 -
Dod04g2686 228 PIRSF PR5 1 228 IPR001938 -
Dod04g2686 228 SUPERFAMILY Osmotin, thaumatin-like protein 24 225 IPR037176 -
Dod04g2686 228 ProSiteProfiles Thaumatin family profile. 23 227 IPR001938 -
Dod04g2686 228 SMART tha2 26 225 IPR001938 -
Dod04g2686 228 PANTHER THAUMATIN-RELATED 7 225 - -
Dod04g2686 228 Pfam Thaumatin family 30 225 IPR001938 -
Dod04g2686 228 PRINTS Pathogenesis-related protein signature 67 78 IPR001938 -
Dod04g2686 228 PRINTS Pathogenesis-related protein signature 215 224 IPR001938 -
Dod04g2686 228 PRINTS Pathogenesis-related protein signature 45 54 IPR001938 -
Dod04g2686 228 PRINTS Pathogenesis-related protein signature 80 109 IPR001938 -
Dod04g2686 228 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Dod04g2686 228 PRINTS Pathogenesis-related protein signature 117 133 IPR001938 -
Dod04g2686 228 CDD TLP-P 26 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2686 Dod-Chr4 50846092 50847234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2686 1 225 Receptor kinase-like Gene Family AT5G38280 37.302 1.16e-46 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2686 - - vra:106767605 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1073 02 13392911 13394164 Dod04g2686 04 50846092 50847234 PCT