Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1073 ATGGCCCTAACGAAAACGCTCTCCATCATCCTCGTGATCGCCATAAGCTGCCTGGCCGCAGCACATGCTGCAAGGTTCGACATCACAAACAGATGCCGTTACACGGTGTGGGCGGCAGCCGTGCCCGGCGGAGGCAGAAGGCTCGACCCCAACCAGTCGTGGACACTCAATGTTGCCAGCGGCACATCGGGGGCACGCATCTGGGGCCGAACCAGCTGCTCCTTCGACCGGTCAGGCCAAGGGAAGTGCCAGACAGGCGACTGCGGAGGCCTCCTCCAGTGCAAAAAATTCGGCACTCCGCCAAACACGCTTGTCGAGTACGCCTTGAACCAGTACAACAACCTCGACTTCTACGACATCTCGTTGGTTGACGGGTTCAACATCCCCATCCAGTTCAGCCCGACATCCAAGGGGTGCACACGCTCCGTTAATTGCACCGCCGACATCAACGGGGAGTGCCCCTCTCGATTGAAGGCTCCTGGGGGATGCAACAACCCTTGCACTGTTATGAAGACCAGCCAGTACTGCTGCACCGGTTCGAAGTGTGAACCCACTGATTATTCCAAGTTCTTCAAGACCAGGTGCCCCGATGCGTACAGTTACCCTAAGGATGATGCAACCAGCACTTTCACTTGCCCCGGAGGAACCAACTATAGGGTTGTATTTTGTCCTTGA 675 0.5689 MALTKTLSIILVIAISCLAAAHAARFDITNRCRYTVWAAAVPGGGRRLDPNQSWTLNVASGTSGARIWGRTSCSFDRSGQGKCQTGDCGGLLQCKKFGTPPNTLVEYALNQYNNLDFYDISLVDGFNIPIQFSPTSKGCTRSVNCTADINGECPSRLKAPGGCNNPCTVMKTSQYCCTGSKCEPTDYSKFFKTRCPDAYSYPKDDATSTFTCPGGTNYRVVFCP* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1073 224 PIRSF PR5 1 224 IPR001938 -
Dod02g1073 224 Pfam Thaumatin family 30 224 IPR001938 -
Dod02g1073 224 ProSiteProfiles Thaumatin family profile. 23 224 IPR001938 -
Dod02g1073 224 Gene3D Thaumatin 24 224 IPR037176 -
Dod02g1073 224 SUPERFAMILY Osmotin, thaumatin-like protein 24 224 IPR037176 -
Dod02g1073 224 PRINTS Pathogenesis-related protein signature 66 77 IPR001938 -
Dod02g1073 224 PRINTS Pathogenesis-related protein signature 79 108 IPR001938 -
Dod02g1073 224 PRINTS Pathogenesis-related protein signature 214 223 IPR001938 -
Dod02g1073 224 PRINTS Pathogenesis-related protein signature 44 53 IPR001938 -
Dod02g1073 224 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Dod02g1073 224 PRINTS Pathogenesis-related protein signature 116 132 IPR001938 -
Dod02g1073 224 PANTHER OS03G0233200 PROTEIN 1 224 IPR001938 -
Dod02g1073 224 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 1 224 - -
Dod02g1073 224 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Dod02g1073 224 ProSitePatterns Thaumatin family signature. 79 94 IPR017949 -
Dod02g1073 224 SMART tha2 26 224 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1073 Dod-Chr2 13392911 13394164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1073 6 224 Receptor kinase-like Gene Family AT5G38280 37.398 1.82e-45 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1073 - - gmx:100301882 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1073 02 13392911 13394164 Dod02g1073 02 13392911 13394164 ECH
Dod02g1073 02 13392911 13394164 Dod04g2686 04 50846092 50847234 PCT