Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2637 ATGAACTCCAACGTTAACGATGACGAAGGAGGAACCAATAGCATGAGCGCTGATGAGGCTGCTGAAGAGTACGCATTGGAGGCTATAGTGGAACACCGCAACCGTGAAATCAGATCCATCCGTAGGTACCTCGTCCGTTACACCACCCAGCTTGAGCAAGCAGAAAAGGATTTGAACGATTATGAATCTCAATTGGCTCGCCTTCGAGCTCAAAAAAACAATGCAGATCAAGCTAAGGCAGTTAGAAATGACGATGCAGCAGCAGAAACCACCGATGTTGTTGTTCAAGTTCAAACAGATGCAGCTGAAACTAATAATAATAATAATAATGCAGTAATAGGTGATACTGATGATGCAGCTGGTTCTTTAGGTGTAGGTTTAGTAGATAATGGAGCTGAATATCAAACTGTGACGACAGATCTTAGTAGATCAGACGGTAGCAGTGAGTTTGATCTTGATGGAAATGAGTTTGGAGGTTATTATTCCATAACTTATCAGCGTCGTCGTCGTCAAGCAGCAAATAGGCCGAAGCTGGTTATTCCTGATGTGGCGCCAACAAGAAGCTGGCAACCCACACGTTCTCCTGCTAGGCCTAGAAGGCACCTTGATACTGTGAATTTCAATGAAATTAATATTGCTGAAACGTCCCAGGTTCAAGGGACCAAAAGGAAGCTAATAGCAGAAGAAGAAGAAGAAGAAGAGCAAGAGTCATCTATTCCTGTGGCAGAAGAGGAAGAATATGAGTCATTGATTCCACTGCTAGCAGATCAAGATGAAGAACACGAGTCATTGATTCCACCTCTTGCAGATCAAGATGAAGAACACGAGTCATTGATTTCACTGCTGGTAGATCAAGACGAAGACAAGTCATTGATCCCATCTCTTGCATATCAAGATGAAGAACACGACTCATCATCATTGATACCTTTGATAGGTAAGAATTCTTCGGCAGGTTCATCAGTGGACTACCAAAGGAGTAGGTTCGTGTCGAGTCTACATAAGAGGAGACTGCGAACTCTCACTCTAAATCCTGTTAATGATCAATTCTTTGTGACCAGTGCTTTGGATGGAGAGGTCCGCCTATGGGAAGCTCAGTATGGCAGGTCTAGATTTGATGTCTCTCTGCTTAGCGTAACAGATGAGTGTTTATCCCCAAGGAAAAGGAGATGGCCAGAAGATATTGCTTGGCACCCAAATGGAAACAGCCTATTTTCAGTACACAGTGCTGATGGCCAAGACTCTCAAGTATCAATCATGCATTTGACGGGAGGAAATAATGGCGAAATGAGAGAAATCCTTGTTGATTTCATGGAGGACAAACCTCATGCGAGGGGTGTTATCAATAGCATTGCTTTCCTGCCACGGGAAGATCCTGCTTTTGTGACAGCAGGAACAGACCATGCTGTTGTGATTTGGAGGGAGAATGGAGGAGAGAACAAATGGACAGCAGAACCACTGCATAGGAACTACCACACTGCTGCCGTCATGGGTGTTGCTGGCATGCAGCACAAGCAAATTGTGCTGTCTGCGGGGAAGGATAGGAGAATTGTGGGTTATGATGTTGCTGCAGGGACCGCAGATTACACACACCAAGTTGATAGTAAATGCTTGGGTGTTGTGTCCAATCCAATCGACTTCAATTTATTCGTTGTTCAAACAGGGACTCCGAAGAGGCAACTCAAATTATTTGATATTAGAATGAAGGAGAGAGAAATTCAAGATTTTGGATGGAAGCAACGAAACAGTGATACTCAATCAGCTCTCATAAAGCCATCTTGGTCTTCTGATGGACTATTTATGACATCTGGTTCAGATGATCCTCTTGTACATATCTTTGATATTAGATATAAAGGTCACAAACCCTCCCTATCTATAGAAGGCCACAAAAAGCGAGTCTTCAAAGCTGCATGGCTTCGCTCTCTTCCTCTTCTTATCTCAATATCATCTGATCTTAACCTTGGATTGCACATGTTTGCATAG 1980 0.4343 MNSNVNDDEGGTNSMSADEAAEEYALEAIVEHRNREIRSIRRYLVRYTTQLEQAEKDLNDYESQLARLRAQKNNADQAKAVRNDDAAAETTDVVVQVQTDAAETNNNNNNAVIGDTDDAAGSLGVGLVDNGAEYQTVTTDLSRSDGSSEFDLDGNEFGGYYSITYQRRRRQAANRPKLVIPDVAPTRSWQPTRSPARPRRHLDTVNFNEINIAETSQVQGTKRKLIAEEEEEEEQESSIPVAEEEEYESLIPLLADQDEEHESLIPPLADQDEEHESLISLLVDQDEDKSLIPSLAYQDEEHDSSSLIPLIGKNSSAGSSVDYQRSRFVSSLHKRRLRTLTLNPVNDQFFVTSALDGEVRLWEAQYGRSRFDVSLLSVTDECLSPRKRRWPEDIAWHPNGNSLFSVHSADGQDSQVSIMHLTGGNNGEMREILVDFMEDKPHARGVINSIAFLPREDPAFVTAGTDHAVVIWRENGGENKWTAEPLHRNYHTAAVMGVAGMQHKQIVLSAGKDRRIVGYDVAAGTADYTHQVDSKCLGVVSNPIDFNLFVVQTGTPKRQLKLFDIRMKEREIQDFGWKQRNSDTQSALIKPSWSSDGLFMTSGSDDPLVHIFDIRYKGHKPSLSIEGHKKRVFKAAWLRSLPLLISISSDLNLGLHMFA* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2637 659 Coils Coil 37 78 - -
Dod04g2637 659 Gene3D - 542 655 IPR015943 GO:0005515
Dod04g2637 659 SMART WD40_4 429 473 IPR001680 GO:0005515
Dod04g2637 659 SMART WD40_4 618 657 IPR001680 GO:0005515
Dod04g2637 659 SMART WD40_4 325 363 IPR001680 GO:0005515
Dod04g2637 659 SMART WD40_4 482 520 IPR001680 GO:0005515
Dod04g2637 659 SMART WD40_4 568 613 IPR001680 GO:0005515
Dod04g2637 659 MobiDBLite consensus disorder prediction 226 246 - -
Dod04g2637 659 ProSiteProfiles Trp-Asp (WD) repeats profile. 330 372 IPR001680 GO:0005515
Dod04g2637 659 MobiDBLite consensus disorder prediction 230 246 - -
Dod04g2637 659 Gene3D - 315 541 IPR015943 GO:0005515
Dod04g2637 659 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 13 658 - -
Dod04g2637 659 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 13 658 - -
Dod04g2637 659 SUPERFAMILY WD40 repeat-like 337 650 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2637 Dod-Chr4 50231386 50236059 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2637 - - ccaj:109813667 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2637 04 50231386 50236059 Dod09g0082 09 1123390 1129319 PCT