Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2350 ATGAAGTGTTTCTGTGAGTCCGTAGTTTCTCTCTGGGTTCTCCTTGCTCTCTGTATTCAATGCGTGTCATCTCAAAACTTCTCGGAAAGTGAAGTACAGCAAGCTAGCTTCCCACCAAGAGGTTGGAATTCCTATGATTCCTTTTGCTGGACAGTTTCTGAAGAGGAATTCTTACAGAATGCTGAAATCGTTTCTCAGCACCTCCATGCTCATGGATATGAGTTTGTTGTGGTGGATTATCTCTGGTATAGGAAGAAAGTCAAGGGTGCTTATCCTGATTCTCTTGGATTTGATGTGATTGATGAATGGGGGAGGATGATTCCTGACCCAGGAAGATGGCCTTCTTCCGTAGGTGGGAAGGGATTCACTGAAGTAGCCAATAAAGTACATAGCATGGGTTTAAAGTTTGGGATTCATGTTATGAGAGGGATAAGCACACAAGCTGTCAATGCAAACACCCCTATCTTAGATACAACAAAGGGAGGTCCTTATCAAGAATCCAGTCGAGCCTGGCATGCAAGAGACATAGCAATCCCGGAAAGGGCTTGTGCATGGATGCCTCATGGTTTCATGAGTGTAAATACAAAGTTGGGAGCTGGGAGAGCTTTTTTGAGATCCCTTTATGAGCAGTATGCTTCCTGGGGAGTTGATTTTGTGAAACATGACTGTGTGTTTGGCGATGACTTGGATTTAAATGAAATAACCTATGTATCAGAGGTTCTCAGGGAGCTTAATCGCCCCATTGTATATTCTCTGTCTCCTGGAACCAGTGTGACACCAGCCATGGCCAAGGATGTCAGCGGACTAGTCAACATGTATCGTATAACAGGAGATGACTGGGATACATGGGCGGATGTCAAAGCTCATTTTGACGTAGCAAGGAATTTTGCTACAGCTAATATGATAGGAGCAAAAGGTTTAAAGGGGAATTCCTGGCCTGATTTGGACATGCTACCGTTTGGATGGCTAACTGATCCAGGTTCAAATGAAGGTCCGCACAGGTTTAGTAAGCTCAATCTAGAAGAGAAGAGGACACAGATGACTTTGTGGTCAATGGCCAAGTCTCCCCTTATGTATGGGGGGGATCTGCGGAAGATTGATCCCACCACATATGGTCTTATCACGAATCCTACCCTGCTGGAAGTTAATTTTTTCAGCTCAAGCAATGCTGAGTTTCCTTACGTCACAAGTTCAAACAACTTGAATCATAAAGATCAGCATCATGGAGGGAAAATGAGAAGATCTAAGAAAGGGAGGAAAACACTATATACACATGCTTTAGGTCTCACAGGCTGCAGTGAAACAAAGGCAAGTGGTTGGTCTGTTGAAAGTCTTAACCAAGATCTTGAAAGAATCTGTTGGAAAAGGAGTTTGGAATATCAGCTTCAGGCCCCTTTCTGTGTTCACAAGCGAGAATTTCGGTTCAGATTAGATGGCGAGAGTATGCATCAAGAGGACTATCATGGGAAGCATCATTTAGTTGCAACCGATAGAATGAAATTTTGCTTGGATGCTTCTCCGAAACAAAAGCTTTCTTCTAAGGAGTTCAAGAGAGGTACCTTTTCTCCTTGCAGATGGGATGCAAATCAGATGTGGGAGCTGAATCCCAATGGGACCATGGTAAATAGTTACTCTGGTCTGTGCGCAACAGTTGAATCTGTCAAAGATGATATTAGTCCTGGTGGAATTCGCTCTTGGATTGCAACGGGAAGAAAAGGAGAACTATACGTGGCTTTCTTCAATCTAAGTGAACAGAAGACACTGATAAATGCAAAGACATCATATCTGGGTAAGGTTTTCAGTGACAGAAGCATCACTTCCTGCAAAGGCAAGGAAGTTTGGAGTGGAAAGGACATCATAACAACAAAGGGAACATTATCAGCGGAAGTGGAAACTCATGGATGTGCATTATTTGTTCTGAATTGCAACTAG 1932 0.4327 MKCFCESVVSLWVLLALCIQCVSSQNFSESEVQQASFPPRGWNSYDSFCWTVSEEEFLQNAEIVSQHLHAHGYEFVVVDYLWYRKKVKGAYPDSLGFDVIDEWGRMIPDPGRWPSSVGGKGFTEVANKVHSMGLKFGIHVMRGISTQAVNANTPILDTTKGGPYQESSRAWHARDIAIPERACAWMPHGFMSVNTKLGAGRAFLRSLYEQYASWGVDFVKHDCVFGDDLDLNEITYVSEVLRELNRPIVYSLSPGTSVTPAMAKDVSGLVNMYRITGDDWDTWADVKAHFDVARNFATANMIGAKGLKGNSWPDLDMLPFGWLTDPGSNEGPHRFSKLNLEEKRTQMTLWSMAKSPLMYGGDLRKIDPTTYGLITNPTLLEVNFFSSSNAEFPYVTSSNNLNHKDQHHGGKMRRSKKGRKTLYTHALGLTGCSETKASGWSVESLNQDLERICWKRSLEYQLQAPFCVHKREFRFRLDGESMHQEDYHGKHHLVATDRMKFCLDASPKQKLSSKEFKRGTFSPCRWDANQMWELNPNGTMVNSYSGLCATVESVKDDISPGGIRSWIATGRKGELYVAFFNLSEQKTLINAKTSYLGKVFSDRSITSCKGKEVWSGKDIITTKGTLSAEVETHGCALFVLNCN* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2350 643 CDD GH27 38 383 IPR002241 GO:0004553|GO:0005975
Dod04g2350 643 Gene3D - 562 642 IPR013780 -
Dod04g2350 643 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 8 640 IPR002241 GO:0004553|GO:0005975
Dod04g2350 643 MobiDBLite consensus disorder prediction 397 417 - -
Dod04g2350 643 Gene3D Aldolase class I 28 385 IPR013785 -
Dod04g2350 643 SUPERFAMILY Ricin B-like lectins 478 555 IPR035992 -
Dod04g2350 643 Gene3D - 417 561 - -
Dod04g2350 643 SUPERFAMILY Glycosyl hydrolase domain 560 641 - -
Dod04g2350 643 SUPERFAMILY (Trans)glycosidases 35 383 IPR017853 -
Dod04g2350 643 Pfam Alpha galactosidase A 209 383 IPR002241 GO:0004553|GO:0005975
Dod04g2350 643 PRINTS Glycosyl hydrolase family 27 signature 32 51 IPR002241 GO:0004553|GO:0005975
Dod04g2350 643 PRINTS Glycosyl hydrolase family 27 signature 341 362 IPR002241 GO:0004553|GO:0005975
Dod04g2350 643 PRINTS Glycosyl hydrolase family 27 signature 126 147 IPR002241 GO:0004553|GO:0005975
Dod04g2350 643 Pfam Alpha galactosidase C-terminal beta sandwich domain 562 640 IPR041233 -
Dod04g2350 643 PANTHER ALPHA-GALACTOSIDASE 8 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2350 Dod-Chr4 47322874 47328456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2350 11 472 Glycoside Hydrolase AT3G26380 65.584 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2350 - - gmx:100783705 1115.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2350 04 47322874 47328456 Dod04g0515 04 7364574 7375767 PCT