Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0515 ATGAAGTGTTTCAACTTGTGTTCCCTATCTCTCTGCGTTCTAATTTGTCTCTGTTTTCAGAGTGTGTCGTCTAAAAATGTATCTGAGTTTGACCCACAGCAAGCTGGCACCCCACCAAGAGGTTGGAATTCCTATGATTCCTTTTCTTGGACAGTTTCTGAACAAGAATTCTTACAGAATGCTGAAATAGTTTCTAAGAGTCTCCATAATCATGGATATGAGTATGTTGTGGTGGATTACCTCTGGTATCGAAGGAAAGTCCCGGGTGCTGGTCATGATTCTTTTGGATTTGATGTGATTGATAAATGGGGGAGGATGATTCCTGACCCAGGAAGGTGGCCTTCTTCTCAAGATGGTAAAGAGTTCAGTGAAGTGGCTAATAAGGTACATAGCATGGGTTTAAAGTTTGGGATTCATGTTATGAGAGGGATAAGCACACAAGCCTACAATGCAAACACTCCTATCCTAGATACGACAACGGGAGATGCTTATCAAGAATCTGGTCGAGTTTGGTATGCAAAAGACATAGCAATCCCAGCAAGGGCTTGTGCATGGATGTCTCACGGTTTTATGAGTGTAGATACAGCCTTGGGTGCTGGGAAAGCTTTTTTGAGATCCCTTTATGAGCAGTATGCTGCATGGGGTGTTGATTTCGGGGCTCTGCAGATTAAAAGTAATAGGAAGCAGCTTGATCGCCCCATTGTATATTCTTTGTCTCCTGGAACTAGTGTGACACCAACCATGGCCAGGAATGTCATTGGACTGGTCAACATGTATCGTATAACAGGAGATGACTGGGATACATGGTGGGACGTGAAAGCTCATTTTGATGTAACGAGGGATTTTTCGATTGCTAATCTGATAGGAGCACCAGGTTTAAATGGGAATTCCTGGCCTGATTTGGACATGCTACCATTTGGATGGCTAACTGATCCTGGTTCGGATGAAGGTCCACACAGGTACAGTAAGCTCAACCTAGAAGAGGAAAAGACACAGATAACTCTCTGGTCTATGGTGAAGTCTCCCCTTATGTATGGAGGGGATCTGCGAAATATTGATCCTACCACATATGATCTTATCACAAATCCTACCCTTCTGGAGATTAATTCTTTTAGCTCAAATAATATGGAGTTTGCTAATATCACAAGCTTGAAGAGTGAAGATCAGGATCTTGGAGGGCAAATGAGAAGATACATCAAAGAAACAAAAACATCATATACACATTCATTAGGTCTCACTAGCTGCTCTGAGTCAAAGGCAAGTGGTTGGACTAGTGAAAGTTTTGATCAGTCTGTTGAAAGAATCTGTTGGAAAAGGAGTTCAGGAAATAAGCACCTGGCTCCTTTCTGTGTACACAAGAGAGAACTTAGCTTCAAATTTATTGAAGAGAGTATGTATCAACAGAACCTTCGAGGGAAATGTCATTTAGTTGCCACCAACAGAATAAAATTTTGCTTGGATGCTTCTCCAAAACGAAAGCTTACTTCTAAAGAGTTCAAGAGAGGCACATTTTCTCCCTGCAGATGGGATGCAAATCAGATGTGGGAGCTGAACCCTAATGGGACCCTGGTAAATAGTTATTCCGGCCTATGTGCAACAGTAGAATCTGTTGCAGCTACTACTGATTCTGGCGGGATTCGCTCTTGGATTGCAACAGGAAGAAAGGGAGAGGTCTATGTGGCTTTTTTCAATCTAAATGAACAGAAGACAGTGATATCTGCCCAGATATCAGACCTGGCTAAAGTTCTTCCTGGCAGAGACTTCAGTTCTTGTGAGGGCACTGAACTGTGGAGTGGAAATGACATGCTACTAGCTCAGGGCTCGCTATCAAAGGCCGTGGAAGCTCATGGAAGTGCATTATTTATTCTGAAGTGCAGCCCCAAAAAGGAAACAAAAATGGTCTCACTGCTGAGGCATAATTTTTCTGTTCTATCCCTCTTCCCATATTGGAGGTGGTAA 1959 0.4273 MKCFNLCSLSLCVLICLCFQSVSSKNVSEFDPQQAGTPPRGWNSYDSFSWTVSEQEFLQNAEIVSKSLHNHGYEYVVVDYLWYRRKVPGAGHDSFGFDVIDKWGRMIPDPGRWPSSQDGKEFSEVANKVHSMGLKFGIHVMRGISTQAYNANTPILDTTTGDAYQESGRVWYAKDIAIPARACAWMSHGFMSVDTALGAGKAFLRSLYEQYAAWGVDFGALQIKSNRKQLDRPIVYSLSPGTSVTPTMARNVIGLVNMYRITGDDWDTWWDVKAHFDVTRDFSIANLIGAPGLNGNSWPDLDMLPFGWLTDPGSDEGPHRYSKLNLEEEKTQITLWSMVKSPLMYGGDLRNIDPTTYDLITNPTLLEINSFSSNNMEFANITSLKSEDQDLGGQMRRYIKETKTSYTHSLGLTSCSESKASGWTSESFDQSVERICWKRSSGNKHLAPFCVHKRELSFKFIEESMYQQNLRGKCHLVATNRIKFCLDASPKRKLTSKEFKRGTFSPCRWDANQMWELNPNGTLVNSYSGLCATVESVAATTDSGGIRSWIATGRKGEVYVAFFNLNEQKTVISAQISDLAKVLPGRDFSSCEGTELWSGNDMLLAQGSLSKAVEAHGSALFILKCSPKKETKMVSLLRHNFSVLSLFPYWRW* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0515 652 Gene3D Aldolase class I 15 371 IPR013785 -
Dod04g0515 652 SUPERFAMILY Glycosyl hydrolase domain 542 624 - -
Dod04g0515 652 PANTHER ALPHA-GALACTOSIDASE 6 623 - -
Dod04g0515 652 Pfam Alpha galactosidase A 227 369 IPR002241 GO:0004553|GO:0005975
Dod04g0515 652 CDD GH27 38 369 IPR002241 GO:0004553|GO:0005975
Dod04g0515 652 Pfam Alpha galactosidase C-terminal beta sandwich domain 544 623 IPR041233 -
Dod04g0515 652 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 6 623 IPR002241 GO:0004553|GO:0005975
Dod04g0515 652 PRINTS Glycosyl hydrolase family 27 signature 126 147 IPR002241 GO:0004553|GO:0005975
Dod04g0515 652 PRINTS Glycosyl hydrolase family 27 signature 327 348 IPR002241 GO:0004553|GO:0005975
Dod04g0515 652 PRINTS Glycosyl hydrolase family 27 signature 32 51 IPR002241 GO:0004553|GO:0005975
Dod04g0515 652 Gene3D - 539 626 IPR013780 -
Dod04g0515 652 SUPERFAMILY Ricin B-like lectins 483 550 IPR035992 -
Dod04g0515 652 SUPERFAMILY (Trans)glycosidases 31 369 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0515 Dod-Chr4 7364574 7375767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0515 33 455 Glycoside Hydrolase AT3G26380 63.387 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0515 - - gmx:100777954 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0515 04 7364574 7375767 Dod04g0515 04 7364574 7375767 ECH
Dod04g2350 04 47322874 47328456 Dod04g0515 04 7364574 7375767 PCT