Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2342 ATGCCTTTAGAGCCGGAGTTTTGGACAGCTTTGGTTGTCATCTTGTGTTTTCTTGGCTTGATTCTGAAGGAGAGTGTTATGGGAGGTAAGAGTTCAAGAGAGGCTGAGGCTGGTAGGAGGCATGTTTCATCAAATTCATATGGTGGCTCTGCTGGTTCATCATCTTCGTGGGATAATACCTATGGATACGCTCAGTCACCATATCCATCAACATATCCACAACAAAATCCATATCAAACGCCTCATCACCACCGCGCACCAGCTCCACCAGCTCAGTATTATGACTACGTACAGCCAAAAAGGAGGTTGGACAGGAGATATTCGAGGATAGCTGACGATTACCGTTCACTGGATGAGGTTACTGCTGCTCTTTCACAAGCTGGCCTGGAATCTTCTAATCTCATTGTTGGCATTGATTTCACCAAGAGCAATGAGTGGACAGGGAAGAGATCATTCAATCGAAAGAGCTTACATCACCTTGGAAATGGTCAAAATCCTTATGAACAAGCAATCTCGATTATCGGGAAAACTCTATCTATCTTTGATGAAGATAACTTGATTCCTTGCTTTGGATTTGGAGATGCATCAACACATGATCAAGATGTCTTCAGTTTCTGTCCAGATGACAAGTTCTGCAATGGGTTTGAGGAAGTTTTGTCAAAATACAGAGAAATTGTTCCTCGTCTCCGACTGGCAGGACCAACTTCGTTTGCCCCTATCATTGAGATGGCCATGACTATTGTTGAGCAAAGTGGCGGCCAATATCATGTCTTGCTAATAATTGCTGATGGACAGGTGACCAGAAGCGTTGACACACAGCATGGCCAGTTAAGTCCACAGGAACAGAAGACAATTGATGCAATTGTAAAAGCCAGTGAGTATCCACTGTCAATTGTTTTGGTGGGAGTTGGAGATGGACCATGGGATATGATGAGGGAATTTGATGACAACATTCCTGCTCGAGCCTTCGACAATTTTCAGTTCGTGAATTTTACCGAAATAATGTCAAGGAGTGTAGATTCAGCCAGGAAAGAGACAGAGTTTGCTCTAGCAGCTTTGATGGAGATACCTTCTCAATATAAGGCAACCATAGACCTTGGCATATTGGGTGCACGGAGGGGACATTCACCGGACAGGGTTGCCCTACCTCCACCTCACTATGACAGGACTTCTAGCAGCAGCACAGCATATTCTCGTTCAAGTAGTTTTCAGCAGAGTACTCCTACAAACACTGCCTATGATAGCGGAGTTAGCACAGAACCATCTCCAAGTGGCGTATATGATAACAAGGTATTAAGATCAATCTTTTCAACTAAGACGCGACTTGCATATTTTCCTGATGTGATCACCATGATTCATGATCAAATGGTCATACATACCTATGTCACTTCAAGTAATGGTTTTTTACACACATATGACATGGTCAACTGCAGGTTTGCCCTATTTGTCTAA 1452 0.4346 MPLEPEFWTALVVILCFLGLILKESVMGGKSSREAEAGRRHVSSNSYGGSAGSSSSWDNTYGYAQSPYPSTYPQQNPYQTPHHHRAPAPPAQYYDYVQPKRRLDRRYSRIADDYRSLDEVTAALSQAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHHLGNGQNPYEQAISIIGKTLSIFDEDNLIPCFGFGDASTHDQDVFSFCPDDKFCNGFEEVLSKYREIVPRLRLAGPTSFAPIIEMAMTIVEQSGGQYHVLLIIADGQVTRSVDTQHGQLSPQEQKTIDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMSRSVDSARKETEFALAALMEIPSQYKATIDLGILGARRGHSPDRVALPPPHYDRTSSSSTAYSRSSSFQQSTPTNTAYDSGVSTEPSPSGVYDNKVLRSIFSTKTRLAYFPDVITMIHDQMVIHTYVTSSNGFLHTYDMVNCRFALFV* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2342 483 SMART VWA_4 131 334 IPR002035 -
Dod04g2342 483 Pfam Copine 156 369 IPR010734 -
Dod04g2342 483 PANTHER RING-FINGER PROTEIN 27 443 - -
Dod04g2342 483 MobiDBLite consensus disorder prediction 387 424 - -
Dod04g2342 483 PANTHER COPINE FAMILY PROTEIN 1 27 443 - -
Dod04g2342 483 SUPERFAMILY vWA-like 132 315 IPR036465 -
Dod04g2342 483 MobiDBLite consensus disorder prediction 375 424 - -
Dod04g2342 483 MobiDBLite consensus disorder prediction 31 91 - -
Dod04g2342 483 MobiDBLite consensus disorder prediction 43 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2342 Dod-Chr4 47281456 47286925 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2342 K16280 - gmx:100800161 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2342 04 47281456 47286925 Dod04g0523 04 7482329 7486707 PCT