Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0523 ATGCATGTGTATTTTTCTTTTTATCACATGATTTTGGAATTGCAGTTGGAGACTTGGACAGCTTTGCTTGCCATTTTGTGCTTCTTGGGGTTTATTCTGAAGGAGAATCTTATGGGAGGGAAGAGTTCAAGAGAGTCTGGTTCTGGCAGGAGGCATGCTTCCTCATATGGGTCTGGTGGTTCTTCTTCATCTTCATGGGATGAATTTGGAGGGTACACCCCACAACCACCATACCCTCAGCAGAATCCATATCAAACCCCTTATCACCACCATGCATCAGCATCAGCTACATATTATGACTATGCACAGCCAAAGAGGAAGCTGGATAGGAGATATTCCAGGATAACTGATGATTATCACTCACTGGATGAGGTCACTGCTGCTCTTGCAAATGCTGGCCTGGAATCTTCTAATCTCATTGTTGGCATTGATTTCACAAAGAGCAATGAGTGGACAGGGAAGAGGTCATTCAATCGCAAATGTCTACATCACATTGGAGGTGGTCATAATCCTTATGAACAAGCAATCTCAATTATTGGGAAAACTTTATCTGTTTTCGATGAAGATAACTTGATTCCTTGCTTTGGATTTGGAGATGCATCAACGCATGATCAAGATGTATTCAGTTTCCATTCAGAAGAGAGGTCCTGCAACGGGTTTGAGGAAGTTTTGGCACGATACAAAGAAATTGTTCCTCGCCTCAGACTTGCAGGACCTACTTCATTTGCCCCTATTGTTGAAATGGCCATAACTATTGTTGAGCAAAGTGGTGGGCAATATCATGTATTGCTGATAATTGCAGATGGACAGGTGACCAGAAGCGTTGACACACAGCGTGGACACTTGAGTCCGCAGGAACAGAAGACAATAGATGCAATTGTAAAAGCCAGTGAGTATCCACTGTCAATAGTTTTGGTGGGAGTTGGAGATGGACCATGGGATATGATGAGAGAATTTGATGATAATATACCTTCTCGAGCATTTGACAATTTTCAGTTTGTAAATTTTACCGAAATAATGTCGAGGAGTGCAGATTCAACCAGAAGAGAGACAGAGTTTGCCCTTGCAGCTTTGATGGAGATACCCTCTCAATATAAGGCAACCTTAGAACTTGGCTTATTGGGGTAA 1128 0.4238 MHVYFSFYHMILELQLETWTALLAILCFLGFILKENLMGGKSSRESGSGRRHASSYGSGGSSSSSWDEFGGYTPQPPYPQQNPYQTPYHHHASASATYYDYAQPKRKLDRRYSRITDDYHSLDEVTAALANAGLESSNLIVGIDFTKSNEWTGKRSFNRKCLHHIGGGHNPYEQAISIIGKTLSVFDEDNLIPCFGFGDASTHDQDVFSFHSEERSCNGFEEVLARYKEIVPRLRLAGPTSFAPIVEMAITIVEQSGGQYHVLLIIADGQVTRSVDTQRGHLSPQEQKTIDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPSRAFDNFQFVNFTEIMSRSADSTRRETEFALAALMEIPSQYKATLELGLLG* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0523 375 SMART VWA_4 136 339 IPR002035 -
Dod04g0523 375 MobiDBLite consensus disorder prediction 49 70 - -
Dod04g0523 375 PANTHER COPINE FAMILY PROTEIN 1 38 375 - -
Dod04g0523 375 MobiDBLite consensus disorder prediction 40 86 - -
Dod04g0523 375 Pfam Copine 161 372 IPR010734 -
Dod04g0523 375 PANTHER RING-FINGER PROTEIN 38 375 - -
Dod04g0523 375 SUPERFAMILY vWA-like 137 320 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0523 Dod-Chr4 7482329 7486707 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0523 K16280 - gmx:100800161 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0523 04 7482329 7486707 Dod04g0523 04 7482329 7486707 ECH
Dod04g2342 04 47281456 47286925 Dod04g0523 04 7482329 7486707 PCT