Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2047 ATGGCGGTGGAGGAGGATGGTGCACAGTTTCAGATGAGGGCGTTGGAGTGTGTTGGCAAAGGTTTCGACTTGGCCAGCGATTTCCGGTTGAGGTTTGCAAAGGGAATTGGAGGAGGTAAGAAGAGATTGGTGGTGCTTGATGAACAGCACAGGAGGGATATTTTGATCCCTGGAGCTGGTGGAGCTACCATTACCGTTAGGGGGGTCTCTGAGGATATTCGTTGTGATAAAGGGGATAGGATAAGGTTCAAATCCGATGTACTTGAATTCAACCAGATGTCCGAGTTGCTTAATCAGAAATCGTCTGTGCAAGGAAAAGTCCCTTCTGGCTATTTTAATGCTCTGTTTGATTTGAGTGGTGATTGGTTCCGGGATGCTGCTGACATCAAGTATCTTGCTTTTGATGGTTATTTCATTTCACTCTACTATTTGCACCTAACTGCTTCTCCACTAGTGCTGCAAGAGGAAGTTAAGAAGTCTGTTCCAGCTCAATGGGATCCTGCATCATTGTCTAGGTTCATCCAAACATATGGTACACACATTGTAGTAGGTATGGCTGTTGGAGGTCAAGATGTAATCTGTGTTAAACAGAAACATTCTTCAAAGATTCAGCCTGGTGATCTCAGAAGACATTTAGAGGATCTTGGAGATTTTTTGTTTTCAGATGTTAGGAGTCCTTCTTTACTACAGAGGAAGACAGCAGATGGCAAACAGAAGATCCCTGAGGTCTTTAATCGTGTGATGCAATCAAACACCATGCAGTTTACCACTATTTCAGAAACATCCAGCAAAGACGGCCTCACTATTATTTGCTCAAAAAGAGGAGGAGATATGTTCAAGAACAGTCACTCCAATTGGCTCCAGACAGTGCCTTCTAATCCAGAAGCAATCCTCTTCAAGTTTGTTCCTATTTCCTCGCTTCTGACAGGAATTCCTGGAAGTGGCTATCTTAGCCATGCAATCAATTTGTATTTACGTTATAAGCCTCCTCTTGAAGATTTACAATATTTCTTGGAGTTTCAAATTCCCAGGCAATGGGCACCAATGTTTTGCGAGTTACCTCTCAGGCATCAGCGGAGAAAGACGTCTTCCCCTTCCCTGCAATTTAGTTTTCTGGGTCCGAAGCTTCATATCAGCTCTACACAGGTGGTAACTGAACAAAAACCTGTAGTTGGCATCCGCTTGTACTTGGAGGGCAGGAAATGTGATAGACTTGCGTTACATGTGCATCATCTTTCAAGCCTCCCAAATACAATGACCCTCTCGTCTGGCACCTCAACCCTGAGCACACCATCTATGTGGCGAGGTTCTGATGATCACGAATCCAATGACCAATTTTTGGAACCAATTAGGTGGAAGAGATTCTCAAAGGTGTGCACGTCAGTGGTCAAGCATGACCCTAACTGGTTGAATGGTTCAGGTGGTGTTTATATTGTAACTGGTGCACAAATCCTTAGCAAAGGGAGTTGGCCAAGGAATGTGCTACATTTGCGTCTTCTCTTCACTCATATTCCCAATTGCAGTATTCGGAAGTCCGAGTGGGCCGGTGCACCAGACAATTCAAGAAAATCATCTTTCCTCACGAATTTGAGCACAAGGTTTTCATTCACACAGCAGAGTACCATTGGTCCGCGGAAGCAGGCCCCAACTGCACTTAACTCCGGTGTTTATCCACATGGCCCACCTATGCCAGTTCGCTCTGGCAAACTGCTTAAATATGTGGAGACAGCTGAGGTCGTGCGAGGTCCGCACGATGCTCCTGGTCATTGGTTGGTAACAGCCGCTAAGCTTGTAACTGAGGGTGGTAAGATTGGAGTACAGGTAAAGTTTGCATTGTTGGATTACTGGTGA 1851 0.4511 MAVEEDGAQFQMRALECVGKGFDLASDFRLRFAKGIGGGKKRLVVLDEQHRRDILIPGAGGATITVRGVSEDIRCDKGDRIRFKSDVLEFNQMSELLNQKSSVQGKVPSGYFNALFDLSGDWFRDAADIKYLAFDGYFISLYYLHLTASPLVLQEEVKKSVPAQWDPASLSRFIQTYGTHIVVGMAVGGQDVICVKQKHSSKIQPGDLRRHLEDLGDFLFSDVRSPSLLQRKTADGKQKIPEVFNRVMQSNTMQFTTISETSSKDGLTIICSKRGGDMFKNSHSNWLQTVPSNPEAILFKFVPISSLLTGIPGSGYLSHAINLYLRYKPPLEDLQYFLEFQIPRQWAPMFCELPLRHQRRKTSSPSLQFSFLGPKLHISSTQVVTEQKPVVGIRLYLEGRKCDRLALHVHHLSSLPNTMTLSSGTSTLSTPSMWRGSDDHESNDQFLEPIRWKRFSKVCTSVVKHDPNWLNGSGGVYIVTGAQILSKGSWPRNVLHLRLLFTHIPNCSIRKSEWAGAPDNSRKSSFLTNLSTRFSFTQQSTIGPRKQAPTALNSGVYPHGPPMPVRSGKLLKYVETAEVVRGPHDAPGHWLVTAAKLVTEGGKIGVQVKFALLDYW* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2047 616 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 9 615 IPR044663 GO:0006952|GO:0012501|GO:2000031
Dod04g2047 616 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 338 IPR020864 -
Dod04g2047 616 Pfam MAC/Perforin domain 112 324 IPR020864 -
Dod04g2047 616 PANTHER OS02G0475300 PROTEIN 9 615 - -
Dod04g2047 616 SMART MACPF_8 129 326 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2047 Dod-Chr4 43979149 43983817 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2047 - - gmx:100787945 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0652 04 9670448 9675391 Dod04g2047 04 43979149 43983817 PCT