Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0652 ATGTGTTGTCCTCACTCAGTGATGATGGAGGAGGGTGTGGGTGTTATGTACACAACCGAGATGGTGGCGTTGGAGTGCCTTGGGAAAGGGTTTGACCTGACTAGTGATTTTCGGTTGAAGTTTGCGAAAGGTGTTAACGGTGGAGGGAAGAGGTTAGTGGTGCTTGATGAAGCCAACAAGAGGGACATCATGGTCCCTGGTGGTGCTACCATTCGTGATGTTTCCCAGGATATACGATGTGATAAAGGGGATAGAATCCGCTTCAAGTCTGATGTTCTTGAATTCAACCAGATGTCTGAGTTGCTTAACCAGAAATCAGCTATACAAGGAAAAATTCCCTCTGGCTATTTTAATGCTCTTTTTGATTTAAGTGGTGATTGGTATCGAGATGCTGATGATATCAAATATCTTGCTTTCGATGGTTATTTCATTTCACTGTATTATTTGCACCTAACTGCTTCACACCTCGTACTGCAAGAGGAAGTAAAGAATTCTGTTCCAGCTCAATGGGATCCGGCTGCTTTGTCCAGGTTCATTCAGACATATGGCACACACATAATAGTAGGTATGGCTGTTGGAGGTCAAGATGTAATCTGTGTCAAACAAAAACACACTTCAAAGATTGCTCCTGGTGATCTCAGAAGGTATCTAGAGGAACTTGGAGATTTTTCCTTTTCAGAATTAAGAAGCCCTTCTTTTATAGGGAGGAGGACAGCAGATGGCAAACAAAAAGTCCCTGATGTCTTTAGTCGTGTGATGCAATCAAACACACTGCAGTTCACCAGTATTTCAGAAACATCAAGCAAGGATGGCCTTACTATTATTTGCTCAAAGAGAGGAGGAGATATGTTCAAGCACAGTCACTCAAATTGGCTCCAGACAGTGCCTTCCAATCCTGAGGCCATCCTCTTCAAGTTTGTTCCTATTTCCTCCCTTCTGACAGGAATTCCTGGAAGTGGCTATCTCAGTCATGCCATCAATTTGTATTTACGTTATAAGCCTTCTACTGAAGATTTACAATACTTCTTGGAGTTTCAAATTCCCAGGCAATGGGCACCCATGTTTTATGAGCTACCTCTGAGGCATCAATGGAAAAAGACATCCTCCCCTTCCCTGCAATTCAGTTTCATGGGTCCCAAGCTTCATATCAGTTCTGCACAGGTAGTGAGTGAACAAAGACCTGTGGTCGGCCTTCGTTTGTACTTAGAGGGCAGAAAATGTGACAGACTAGCATTACATATACAGCACCTTTCAAGCCTCCCAAACACAATGATTTTCTCTTCAGGCTCCTCAACCATGAGCAGGCCATCTATGTGGCGAGGATCCGATGACAATGAATCCAGCGAACTATTCCTGGAGCCAATAAGATGGAAGGGATTCGCAAATGTGTGCACCTCTGTGGTCAAGCATGACCCTGAATGGTTGGATGAATCAAGCGGTGTTTACATTGTAACCGGTGCGCAACTGATTAGCAAAGGGAATTGGCCAAGGAATGTTCTTCATTTGCGCCTCCAATACGCTCACATACCAAATTGCAGTATCAGGAAGTCAGAATGGGCTGCAGTACCTGAGGCTTCAAGAAAATCATCATTCCTCAAAAACCTGAGCTCAACATTTTCATTCACACAGCAGAGTGCCAGCGGTACCCAGAAGCAGACTCCAACAGCACTAAACTCTGGTGTTTATCCAGATGGTCCACCTGTGCCGGTTCGTTCTGCTAAACTGCTTAAATATGTCGAAACTGGTGAGGTTGTGCGCGGCCCCCATGATGCTCCTGGCCATTGGTTGGTAACAGCTGCTAAGCTTGTCACTGAGGGTGGCAAGATTGGATTGCAGGTTAAGTTTGCATTGTTAGACTACTAG 1863 0.4466 MCCPHSVMMEEGVGVMYTTEMVALECLGKGFDLTSDFRLKFAKGVNGGGKRLVVLDEANKRDIMVPGGATIRDVSQDIRCDKGDRIRFKSDVLEFNQMSELLNQKSAIQGKIPSGYFNALFDLSGDWYRDADDIKYLAFDGYFISLYYLHLTASHLVLQEEVKNSVPAQWDPAALSRFIQTYGTHIIVGMAVGGQDVICVKQKHTSKIAPGDLRRYLEELGDFSFSELRSPSFIGRRTADGKQKVPDVFSRVMQSNTLQFTSISETSSKDGLTIICSKRGGDMFKHSHSNWLQTVPSNPEAILFKFVPISSLLTGIPGSGYLSHAINLYLRYKPSTEDLQYFLEFQIPRQWAPMFYELPLRHQWKKTSSPSLQFSFMGPKLHISSAQVVSEQRPVVGLRLYLEGRKCDRLALHIQHLSSLPNTMIFSSGSSTMSRPSMWRGSDDNESSELFLEPIRWKGFANVCTSVVKHDPEWLDESSGVYIVTGAQLISKGNWPRNVLHLRLQYAHIPNCSIRKSEWAAVPEASRKSSFLKNLSSTFSFTQQSASGTQKQTPTALNSGVYPDGPPVPVRSAKLLKYVETGEVVRGPHDAPGHWLVTAAKLVTEGGKIGLQVKFALLDY* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0652 620 MobiDBLite consensus disorder prediction 543 563 - -
Dod04g0652 620 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 10 343 IPR020864 -
Dod04g0652 620 PANTHER OS02G0475300 PROTEIN 19 620 - -
Dod04g0652 620 MobiDBLite consensus disorder prediction 543 559 - -
Dod04g0652 620 Pfam MAC/Perforin domain 117 329 IPR020864 -
Dod04g0652 620 SMART MACPF_8 134 331 IPR020864 -
Dod04g0652 620 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 19 620 IPR044663 GO:0006952|GO:0012501|GO:2000031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0652 Dod-Chr4 9670448 9675391 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0652 - - gmx:100787945 1041.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0652 04 9670448 9675391 Dod04g2047 04 43979149 43983817 PCT