Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2033 ATGAAGAAGATGCAGGAAATGAGAGGCCGATCCTTGTGGTTGTGCGTGTGCTTGTTGGTGGTGGGAAGCAGGGTGGTGGAGGGAGCAGATACTTTGGCGGATAAGTGCAGCACGGTGGTGCAGCAGGTGATCCCGTGCCTGAACTTCGCGACGGGGAAGGCAGGGGTTCCCTCGAAGGAGTGCTGCGACGCGTCCTCAAAGATAAAGGACAGTGCCCCTGAGTGCTTGTGCTACGTCATCCAGCAGACCCACAAGGGTAGCCCTGAGATCAAGGGCATGGGTATTCAAGAGGCTAGACTCATTCAGCTCCCTTCTGCCTGTAATCTGAAGAATGCCAGCATCACCAATTGTCCTAAGCTTCTGGGTCTTCCTCCAAACTCCCCAGACGCCGCTATCTTCACGAATGCTACTTTAGCAAACGGGACGGCTTCATCGACAGCAACCCCGACCTCGCAGAACGATTCTTATGGAACCATGCTTCGACCCCCTCCCATCGCAGGCATAATCGTGGTGGCGTTGGCCATGATCCTCGTCGTGATTCCCACCGGATTTGTCAGCATCTACTCATCATGA 573 0.548 MKKMQEMRGRSLWLCVCLLVVGSRVVEGADTLADKCSTVVQQVIPCLNFATGKAGVPSKECCDASSKIKDSAPECLCYVIQQTHKGSPEIKGMGIQEARLIQLPSACNLKNASITNCPKLLGLPPNSPDAAIFTNATLANGTASSTATPTSQNDSYGTMLRPPPIAGIIVVALAMILVVIPTGFVSIYSS* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2033 190 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 13 180 IPR043325 -
Dod04g2033 190 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 34 117 IPR036312 -
Dod04g2033 190 CDD AAI_LTSS 45 109 - -
Dod04g2033 190 Gene3D - 33 114 IPR036312 -
Dod04g2033 190 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 13 180 - -
Dod04g2033 190 SMART aai_6 36 117 IPR016140 -
Dod04g2033 190 Pfam Probable lipid transfer 26 117 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2033 Dod-Chr4 43805882 43808862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2033 34 180 Acyl Lipid Metabolism Gene Families AT1G27950 50.667 2.61e-45 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2033 - - ahf:112734859 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0626 04 9185470 9190561 Dod04g2033 04 43805882 43808862 PCT