Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0626 ATGAAGCAGCAACAGCAAAGTAAAGCTCAGATAACGTTCCTTCTGTGCTTCTTTTTGCTGATTATTGTGGGTGGTAATAACAGGGTGAACGGTGCTGATGATTTGGCCCAAAAGTGTGCCCAAGTGGTGCAAAAGGTGATTCCTTGTTTGAACTTTGCGACGGGTAAGGCAGAGACACCGTCCAAGGAGTGTTGTGACGCTGGGGCGGAGATAAAGGAGACTGACCCAGCGTGCTTGTGCTACATCATTCAGCAGACACATGATGGTAGCCCAGAGAGCAAGAGCATGGGTATTCAAGAGGCTAGGCTGCTTCAACTTCCTTCTGCTTGTAACGTGAACGCCAACATCAGCCTATGTCCCAAGCTTTTGGGTCTATCTCCAAGTTCCCCTGACGCTGCTATCTTCACAAATTCTTCTAAGGTAACGCCTACATCAGCACCTGCATCCACACATGCCTCTCCCTCGACCCCACAGAGCCAGAAGAACTCGTATGGAACCATGATTAGACCTCCAATGATCACTGAGCTGATGGTTATGGCTTTGGCCATTGTTCTCATTGCAATGCCAACCGGATTTGCTAGAATTCAGTACATGATGTGGGGTGAATGA 609 0.4844 MKQQQQSKAQITFLLCFFLLIIVGGNNRVNGADDLAQKCAQVVQKVIPCLNFATGKAETPSKECCDAGAEIKETDPACLCYIIQQTHDGSPESKSMGIQEARLLQLPSACNVNANISLCPKLLGLSPSSPDAAIFTNSSKVTPTSAPASTHASPSTPQSQKNSYGTMIRPPMITELMVMALAIVLIAMPTGFARIQYMMWGE* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0626 202 PRINTS Plant phospholipid transfer protein signature 59 73 IPR000528 GO:0006869|GO:0008289
Dod04g0626 202 PRINTS Plant phospholipid transfer protein signature 38 54 IPR000528 GO:0006869|GO:0008289
Dod04g0626 202 PRINTS Plant phospholipid transfer protein signature 97 114 IPR000528 GO:0006869|GO:0008289
Dod04g0626 202 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 37 120 IPR036312 -
Dod04g0626 202 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 14 190 IPR043325 -
Dod04g0626 202 Pfam Probable lipid transfer 31 119 IPR016140 -
Dod04g0626 202 SMART aai_6 39 119 IPR016140 -
Dod04g0626 202 Gene3D - 36 117 IPR036312 -
Dod04g0626 202 MobiDBLite consensus disorder prediction 136 165 - -
Dod04g0626 202 CDD AAI_LTSS 48 112 - -
Dod04g0626 202 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 14 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0626 Dod-Chr4 9185470 9190561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0626 37 201 Acyl Lipid Metabolism Gene Families AT1G27950 46.988 8.85e-44 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0626 - - adu:107482371 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0626 04 9185470 9190561 Dod04g0626 04 9185470 9190561 ECH
Dod04g0626 04 9185470 9190561 Dod04g2033 04 43805882 43808862 PCT