Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2029 ATGAACTCTCACGCGCGTGCTCTCTACTCGCTCGCTGTCATACAGTTCAACGGCAGCGGCGGCACCAAGAGCGACAAGGACCTCCGTGCCGGCGTCGCGCTCTGCGCACGCGCCGCCTTCCTCGGCCACGTCGACGCGCTGCGCGAGCTCGGCCACTGCCTCCAGGACGGTTACGGAGTCCGCCAGAACATCGCCGAGGGACGGCGGTTTCTCGTCCAGGCCAACGCAAGGGAACTCGCCGCCGTGATCTCTGCCGGAGCCACCGCGCGCCACTGGTTGACGTGGAACCTCCACCCACTCCGGCAAATGGCCGGGTCGGCAGGGTGCCCGCTGCTCAGCGACTTCGGGTGCAACGTGCCGGCGCCGGAGGCCCACCCTGCGAGCAGGTTCATGACGGAGTGGTTCGCTTTGCGGGGCGGGTCGCCGGGCCCGGGCCTGAGGCTGTGCTCGCACGCGGGTTGTGGGCGGCCCGAGACGAGGAAGCACGAGTTTCGGAGGTGTTCGGTGTGTGGAGCGGTGAACTACTGCTCACGCGCGTGCCAAGCGCTTGATTGGAAGCTCCGGCACAAGGCGGAGTGCGCCCCCGTGGAACGGTGGCTTGATGATGACGGTGAGGACGTCGACGACGGTGGCGTTGACGGCGACGGTGGCGTCGTGGTGGTGGATAGCTAG 672 0.6801 MNSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNIAEGRRFLVQANARELAAVISAGATARHWLTWNLHPLRQMAGSAGCPLLSDFGCNVPAPEAHPASRFMTEWFALRGGSPGPGLRLCSHAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKAECAPVERWLDDDGEDVDDGGVDGDGGVVVVDS* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2029 223 SUPERFAMILY HCP-like 4 74 - -
Dod04g2029 223 Pfam MYND finger 153 193 IPR002893 -
Dod04g2029 223 Gene3D - 145 197 - -
Dod04g2029 223 SUPERFAMILY HIT/MYND zinc finger-like 148 198 - -
Dod04g2029 223 Gene3D Tetratricopeptide repeat domain 1 96 IPR011990 GO:0005515
Dod04g2029 223 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 1 223 - -
Dod04g2029 223 PANTHER MYND DOMAIN-CONTAINING 1 223 IPR044508 -
Dod04g2029 223 ProSiteProfiles Zinc finger MYND-type profile. 151 193 IPR002893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2029 Dod-Chr4 43744307 43746860 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2029 - - gmx:100798174 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0620 04 8973164 8975329 Dod04g2029 04 43744307 43746860 PCT