Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2027 ATGGCCACCAACCAGCAGGCAGAGGCTGAGAGGAAGAAGAGTACTGGCCAAGAACTGAAGCATCTTGGGTTTGCCAAGATTGCTGCGATTCAGGCCTTTGTGTGTGTCTCGAATCTCTACGACTACGCAAAGCAGAACTCGGGACCTTTGAGATCTGCCGTTGGAACCGTCGAGGGAACTGTAACCGCCGTTCTCGGCCCTGTCTACCGCAAATTCAAGGATGTCCCTTACGATCTCCTCGTTTTTGTCGACAACAAGGTGGACGAAGCTACCCACAAGTTTGATGAGCATGCTCCTCCTTTAGTTAAGCAGGTAGCAAGCCAAGCTAAGGTTTTAATTGAGGAAGTGACACACAAAGCGGAGAAAGTTGTGAGTGAGGCTCAATCTGGAGGGCCACGAGCAGCTGCACATTATGTTGCTGCAGAGTCCAAGCAATTTGTGCTAATTGGATCAGTGAAACTGTGGGCAGGTCTAAATCAGTATCCACCATTCCATGCGGTGGCAGAGATGGCATTTCCAACGGCTGCACATTGGTCGGAAAGGTACAATCATGTGGTCAAGAACATGACTGAAAAGGGGTACACTGTGTTTGGGTACTTGCCTTTGGTTCCCATTGACGAGATAGCTAAGGCATTTAAACAGGGAGAAGCCAAGGTGAATGGAGATGAACCAACTACTGCGGAGCAGATTCCAGTATCTGAGTATTAG 708 0.4901 MATNQQAEAERKKSTGQELKHLGFAKIAAIQAFVCVSNLYDYAKQNSGPLRSAVGTVEGTVTAVLGPVYRKFKDVPYDLLVFVDNKVDEATHKFDEHAPPLVKQVASQAKVLIEEVTHKAEKVVSEAQSGGPRAAAHYVAAESKQFVLIGSVKLWAGLNQYPPFHAVAEMAFPTAAHWSERYNHVVKNMTEKGYTVFGYLPLVPIDEIAKAFKQGEAKVNGDEPTTAEQIPVSEY* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2027 235 Pfam Rubber elongation factor protein (REF) 16 214 IPR008802 -
Dod04g2027 235 PANTHER RUBBER ELONGATION FACTOR-RELATED 13 229 - -
Dod04g2027 235 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 13 229 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2027 Dod-Chr4 43736000 43737959 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2027 - - gmx:100499806 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0619 04 8925032 8931198 Dod04g2027 04 43736000 43737959 PCT