Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0619 ATGGCCACCAGCGAGAGAGAGGTAAAGTATGAGAGCAAGAATAAGGAACTAAAGCACCTGGGTTTTGTGAGGGTCGCTGCTATTAAAACTTTTGTGGTTGTGTCAAATCTGTATGAATACGCAAAGCAGAGCTCAGGGCCTTTGAGATCCACCGTTGGAACCGTGGAGGGCACGGTGACCTCCGTTCTCGGTCCTGTCTACAACAAATTCAAGGGCTTCCCCGATGAAATCCTGGTTTTTGTTGACGACAAGGTGGATGAAGCTACTCACAAGTTCAGTGAGCATGCTCCTTCTTTTGCCAAGCAGGCTGCCTCCCAAGCTAAGGATTTGATTCAGAAAGTGGCACACGAGGCTGGGAAAGTTGTGAGTGAGGCTCAGTGTGGAGGGCCAGCAGCAGCTATACATCATGTTACTCGAGAGTCAAAGCATTTCCTGCTAACTAACTCGGTGAAGTTGTGGACTGGACTCGACCAGTATCCACCATTCCATGCGGTGGCAAAGATGGCAGTCCCCACTGCTGCTCACTGGTCAGAGAAGTACAACCATGTGATTAAGCACATGACTGGAAAGGGGTATGCTGTCTTTGGTTATTTACCTTTGATTCCCATTGATGAGATAGCTAAGGCATTCAAGCAGGGAGAAGGGAACTTGAAAGCGGATGAAGCTGCAGGCTTTGAGGAGAAGAAATCTGAATCATCCGATTCTGATTGA 711 0.4824 MATSEREVKYESKNKELKHLGFVRVAAIKTFVVVSNLYEYAKQSSGPLRSTVGTVEGTVTSVLGPVYNKFKGFPDEILVFVDDKVDEATHKFSEHAPSFAKQAASQAKDLIQKVAHEAGKVVSEAQCGGPAAAIHHVTRESKHFLLTNSVKLWTGLDQYPPFHAVAKMAVPTAAHWSEKYNHVIKHMTGKGYAVFGYLPLIPIDEIAKAFKQGEGNLKADEAAGFEEKKSESSDSD* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0619 236 Pfam Rubber elongation factor protein (REF) 12 212 IPR008802 -
Dod04g0619 236 PANTHER RUBBER ELONGATION FACTOR-RELATED 2 236 - -
Dod04g0619 236 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 2 236 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0619 Dod-Chr4 8925032 8931198 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0619 - - gmx:112935895 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0619 04 8925032 8931198 Dod04g0619 04 8925032 8931198 ECH
Dod04g0619 04 8925032 8931198 Dod04g2027 04 43736000 43737959 PCT