Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2007 ATGCCTCCTCCTCCCTCAAACTTCCCTCTTCGTTGGGAGAGCACAGGTGACCAATGGTGGTATGCATCGCCAATTGATTGGGCAGCAGCAAATGGCCTCTATGACCTTGTCATTGAGCTTCTCCACCTTGACACCAACCTCCTCATCAAGCTGACTTCCCTTCGTAGAATCCGCCGCCTTGAAACCGTGTGGGATGATGAGGCTAACTTTGAGGATGTTGCTAAGTGCCGCTCAAAGGTTGCAAGGAACCTTCTGCTTGAGTGTGAGGATGGAAGGGGACACAATTCTCTCATACGTGCTGGTTATGGTGGATGGCTTCTCTACACTGCTGCCTCAGCTGGGGACTTGGACTTTGTTCATGAGTTGTTGAGGAGAGACCCTTTGCTTGTTTTTGGTGAAGGAGAGTATGGTGTCACTGATGTACTTTATGCTGCTGCCAGGAGCAAGAACTGTGAGGTTTTTAAGCTCTTGCTTGATTCTGCACTCTTTTCCAAAGAGTGCCTTAGCAGCAATGGAGAAGAGTTGGATGAGAGTGGTGGGGTTTTCAAGAGGGACATGGCGAATAGGGCCATTCATGCTGCTGCAAGAGGAGGGAATTGGGAAATGCTGAAGCAGCTTATGGGAAGTGTTTATGAGATTTTGTCATATAGAGATGCCCAAGGATGTACTGTCTTGCATGCAGCAGCTGGCAGAGGGCAGGTTGAGATGGTGAGAAATCTAATTGAATCATATGATACTATCAACTCAACTGATACTCAAGGCAATTCAGCATTACATGCGGCTTCTTACAGGGGTTACTTACCTGTGGTAGAGATTCTCATTCAAGCATCACCTTCATTAGCATTGCTAACCAATCACTATGGAGATACTTTTCTTCATATGGCAGTGGCTGGTTTCAGAAGCCCTGGTTTCCGTAGGCTAGACAAGCACACTGAGCTCATGAACCAATTGACAAGTGAAAAGATTGTGAAAATGCAGGACATCATCAATGTCAAGAACAACGATGGAAGAACAGCTCTTCATTTAGCTGTGATTCATAATATTCAATGTGACATAGTTGAATTACTGATGTCTGTTCCTTCAATTGATTTGAACGTTCGCGATGCTGATGGGATGACCCCCTTGGATCATCTGAAGCAAAGACCAAAATCAGCATCCTCTGAAATCTTAATCAAGCAGTTGATTTCAGCTGGTGGTATCTCTGATTGTGAAGATTATGTGGCAAGAAATGCCCTTGTTACTCATCTGAAAAACCATGGCATTGGAACTAGTCCTGGAACTTCGTTTAGAATACGGGACGGAGAGATATTCTTGCACACAGGCATCGATAAATCCTATTATGCCAATTATGATCAGGCAAGTGTAGAATCAAATTCATGCTCAGGTGAAATAAGCATTTATGAGTCCGCCAGTTACCCTCATAGAACCAAATCTTCTCCTATCAACTATGCTGCAAGGCGCTTAAAGTCTCTTTTCAATTGGCATAAGAGAAGAGAGACAAAAGAAGCTGCCTCCGAGTTTGCAGATGATGATTCTGTGGCTTCTTTTGTTTCAAGTAAGAAGTTGGAAGACATTCCAATTCCATTGCGGCAAAGATACTCAAAGCCATGTTCCCTTCCAAACAACAAAAGAACATTTGCTATAAGGACCTGTGTTCCAAGTCCATCCAGCAAAAAGTATTTTGCCGCAGGCCTAATGCAAGGGGTAATTCAGGTAAAGCCCCATGTCCCAATTTCTGCTCATTCAGCTGGTGGTCCTTTTCAAGAGTTGTCCTTGTCTTCTCATTCTCTGAACAATAAACAAAAGGGTGTTGATATAATGGGACCCTCCTGCTCCAATCGGTCAAATGATGATTGTACACTGCAGTTGAACTACAGGCAGGGATCCTTCAATAAGAAATTGATGAATAAGTATTTTTCTTTTGGAGCACAAGGCCAGGCTTTTCAAGGTGCAAATAGCTGCACGAAGACAAATCTAAATTCCAGGCGTTTCAGTTCTTTAGTTGCGTGA 2010 0.4388 MPPPPSNFPLRWESTGDQWWYASPIDWAAANGLYDLVIELLHLDTNLLIKLTSLRRIRRLETVWDDEANFEDVAKCRSKVARNLLLECEDGRGHNSLIRAGYGGWLLYTAASAGDLDFVHELLRRDPLLVFGEGEYGVTDVLYAAARSKNCEVFKLLLDSALFSKECLSSNGEELDESGGVFKRDMANRAIHAAARGGNWEMLKQLMGSVYEILSYRDAQGCTVLHAAAGRGQVEMVRNLIESYDTINSTDTQGNSALHAASYRGYLPVVEILIQASPSLALLTNHYGDTFLHMAVAGFRSPGFRRLDKHTELMNQLTSEKIVKMQDIINVKNNDGRTALHLAVIHNIQCDIVELLMSVPSIDLNVRDADGMTPLDHLKQRPKSASSEILIKQLISAGGISDCEDYVARNALVTHLKNHGIGTSPGTSFRIRDGEIFLHTGIDKSYYANYDQASVESNSCSGEISIYESASYPHRTKSSPINYAARRLKSLFNWHKRRETKEAASEFADDDSVASFVSSKKLEDIPIPLRQRYSKPCSLPNNKRTFAIRTCVPSPSSKKYFAAGLMQGVIQVKPHVPISAHSAGGPFQELSLSSHSLNNKQKGVDIMGPSCSNRSNDDCTLQLNYRQGSFNKKLMNKYFSFGAQGQAFQGANSCTKTNLNSRRFSSLVA* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2007 669 Gene3D - 13 418 IPR036770 -
Dod04g2007 669 ProSiteProfiles Ankyrin repeat region circular profile. 220 251 - -
Dod04g2007 669 ProSiteProfiles Ankyrin repeat profile. 253 285 IPR002110 GO:0005515
Dod04g2007 669 Pfam Ankyrin repeats (3 copies) 191 275 IPR002110 GO:0005515
Dod04g2007 669 SMART ANK_2a 287 327 IPR002110 GO:0005515
Dod04g2007 669 SMART ANK_2a 20 49 IPR002110 GO:0005515
Dod04g2007 669 SMART ANK_2a 136 167 IPR002110 GO:0005515
Dod04g2007 669 SMART ANK_2a 220 249 IPR002110 GO:0005515
Dod04g2007 669 SMART ANK_2a 186 215 IPR002110 GO:0005515
Dod04g2007 669 SMART ANK_2a 253 282 IPR002110 GO:0005515
Dod04g2007 669 SMART ANK_2a 335 366 IPR002110 GO:0005515
Dod04g2007 669 SMART ANK_2a 102 131 IPR002110 GO:0005515
Dod04g2007 669 SMART ANK_2a 370 405 IPR002110 GO:0005515
Dod04g2007 669 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 4 663 - -
Dod04g2007 669 Pfam Ankyrin repeat 335 368 IPR002110 GO:0005515
Dod04g2007 669 SUPERFAMILY Ankyrin repeat 106 391 IPR036770 -
Dod04g2007 669 ProSiteProfiles Ankyrin repeat region circular profile. 253 275 - -
Dod04g2007 669 ProSiteProfiles Ankyrin repeat profile. 220 252 IPR002110 GO:0005515
Dod04g2007 669 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 4 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2007 Dod-Chr4 43512665 43515965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2007 107 376 Miscellaneous Gene Families AT2G31820 29.091 1.07e-18 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2007 - - gmx:100791999 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0591 04 8450684 8454393 Dod04g2007 04 43512665 43515965 PCT