Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0591 ATGTCTGCTACCTCATCACACTCATACTTCCCTCTTCGGTGGGAAAGCACCGGCGACCAGTGGTGGTACGCCTCCCCCATCGACTGGGCCGCCGCAAACGGCCTCTACGACCTCGTCGTTGAGCTCCTCCACCTGGACACCAACCTCCTCATCAAGCTCACCTCCCTCCGCCGCATCCGCCGCCTCGAGTCCGTCTGGGAGGACTACCACCACCACCCTCCACATTTCCACAATGTCGCCAAATGCCGCTCCCACGTCGCCAGAAGCCTCATGCTCGAGTGCGACCACAACAACAATGGGAACTCTCTCATTCGTGCTGGCTACGGTGGGTGGCTTCTCTACACTGCTGCGTCAGCCGGTGACGTTGGTTTCGTGGAAGAGTTGCTTGGGAGGGACCCTCTGTTGGTGTTTGGGGAAGGGGAGTATGGGGTCACCGACATGCTGTATGCTGCGGCGAGGAGCAACAGTAGTGAGGTGTTTAGGGTGCTGCTTGATTCTGCGTTGTTGAAGAGAGGGGGTGGTGGTGGTGGTGGTGAGGAATTGGTGGTGGATGAGAGTGGTGGCGGAGGGGCTTTTAAGAGGGACATGGTGAATAGGGGTGTCCATGCTGCTGCTAGAGGAGGGAACTGGGAGGTACTGAAGGAGCTTCTTGCTGATCATGGAACTGGTGGTTGTTCTGATGTGATGTTGGGTTATAGGGATGCTCAAGGATGCACTGTCTTGCATACAGCGGCTGGCAGAGGCCAGGTTCAGGTCGTGAGAAATCTACTTGCATCGTTTGATTTTATCAACTCAACAGATGCACAAGGGAACACAGCATTACATGTAGCTTCTTACAGGGGTCACTTACCTGTGGTAGAGATTCTGCTTCTTGCATCTCCCTCACTGGCATTGTTGATCAATCACCATGGAGACACTTTTCTTCACATGGCAGTGGCTGGTTTCAAAAGGCCCGGTTTCCGGAGACTGGACAAGCACATTGAGCTCATGAAGGAATTGGTCAGTGGAAAGATTGTGAACATGCAGGACATCATCAATGTCAGGAACGACGATGGAAGAACTGCTCTTCATGTTTCCGTGATCGATAACATCCAATGTGAGCTTGTGGAATTGTTGATGTCCGTGCAAACAATTGATTTGAACATCATTGATGCTGACGGCATGACCCCTTTGGATCTTCTGAAGCAAAGATCACCATCAGCATCTTCTGAGATTCTAATCAAGCAGTTGATTTCAGCCGGAGGGATCTCCAATCATGATGACATCGCTGTGGCAAGAAACAACAACATTTTCACTGATACAAAAACACATGGCATTGGAGGCAGTCCTGGCACTTCATTTAGAATACCAGATGCAGAGATTTTCTTGTACACAGGCATTGAGAGTGCATCTGATGCCAATTATGATCAAGCGAGTGTGGAATCAAATTCTTTCTCAGGTGAACTAAGCAGCTCTGACTCAGCCAATTCCCCACCTAATAATAACAACAGCAAGTCCAATAACTCTGTCAATCACGCCGCGAGGCGATTGAAGCTTCTTCTCCGGTGGCCTAGCAGAAGAGAGGCAAATGCATCAGCCTCAGAGCTAGATGATGATTATGACTCATTAGATCCTTTTGGTTGGAGTAGAAACTCGGAAGAGTTTCCGATCTCATTAAGGCAAAGATACTCGCAACAATCATGCTCCCTTCCAAACAACAAAAGAACACAATCTATTAGGACTAGTAATCTTCCAAGTCCATCCTCCAGGATGAATTTCACTGCAGGCCTAATGCAAGGGGTGATTCAGGTGAAGCCACATGTGCCTTTTCCTTCTGCTCATTCAACTACAAGCCCTTTTCAAGAACTGTCTGTGGCTTCTCTTTCTTCGATTTATAAACAGAAGGGTTCAGATACATTGGGACCCTCTTGCTCCAATCGATCAATAGATGATGGCACGCTGCAATTGAACTGCAACAAAGGTTCCTTCAATAAGAAATTGATGAATCGGTATTTTTCTTTCGGAGCACAAGGCCTGGCAGTGGAAGGTTCAAATAGCTGTGCAAGGTCAAATCGGAGTCATAAGCGTTTCGGTTCTGTTGTTGCCTAG 2088 0.489 MSATSSHSYFPLRWESTGDQWWYASPIDWAAANGLYDLVVELLHLDTNLLIKLTSLRRIRRLESVWEDYHHHPPHFHNVAKCRSHVARSLMLECDHNNNGNSLIRAGYGGWLLYTAASAGDVGFVEELLGRDPLLVFGEGEYGVTDMLYAAARSNSSEVFRVLLDSALLKRGGGGGGGEELVVDESGGGGAFKRDMVNRGVHAAARGGNWEVLKELLADHGTGGCSDVMLGYRDAQGCTVLHTAAGRGQVQVVRNLLASFDFINSTDAQGNTALHVASYRGHLPVVEILLLASPSLALLINHHGDTFLHMAVAGFKRPGFRRLDKHIELMKELVSGKIVNMQDIINVRNDDGRTALHVSVIDNIQCELVELLMSVQTIDLNIIDADGMTPLDLLKQRSPSASSEILIKQLISAGGISNHDDIAVARNNNIFTDTKTHGIGGSPGTSFRIPDAEIFLYTGIESASDANYDQASVESNSFSGELSSSDSANSPPNNNNSKSNNSVNHAARRLKLLLRWPSRREANASASELDDDYDSLDPFGWSRNSEEFPISLRQRYSQQSCSLPNNKRTQSIRTSNLPSPSSRMNFTAGLMQGVIQVKPHVPFPSAHSTTSPFQELSVASLSSIYKQKGSDTLGPSCSNRSIDDGTLQLNCNKGSFNKKLMNRYFSFGAQGLAVEGSNSCARSNRSHKRFGSVVA* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0591 695 ProSiteProfiles Ankyrin repeat profile. 236 268 IPR002110 GO:0005515
Dod04g0591 695 SMART ANK_2a 142 172 IPR002110 GO:0005515
Dod04g0591 695 SMART ANK_2a 386 421 IPR002110 GO:0005515
Dod04g0591 695 SMART ANK_2a 351 382 IPR002110 GO:0005515
Dod04g0591 695 SMART ANK_2a 108 137 IPR002110 GO:0005515
Dod04g0591 695 SMART ANK_2a 269 298 IPR002110 GO:0005515
Dod04g0591 695 SMART ANK_2a 22 51 IPR002110 GO:0005515
Dod04g0591 695 SMART ANK_2a 236 265 IPR002110 GO:0005515
Dod04g0591 695 SMART ANK_2a 303 343 IPR002110 GO:0005515
Dod04g0591 695 ProSiteProfiles Ankyrin repeat profile. 269 290 IPR002110 GO:0005515
Dod04g0591 695 SUPERFAMILY Ankyrin repeat 113 406 IPR036770 -
Dod04g0591 695 ProSiteProfiles Ankyrin repeat region circular profile. 269 290 - -
Dod04g0591 695 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 7 689 - -
Dod04g0591 695 MobiDBLite consensus disorder prediction 560 581 - -
Dod04g0591 695 MobiDBLite consensus disorder prediction 471 504 - -
Dod04g0591 695 Pfam Ankyrin repeats (3 copies) 202 290 IPR002110 GO:0005515
Dod04g0591 695 Gene3D - 16 172 IPR036770 -
Dod04g0591 695 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 7 689 - -
Dod04g0591 695 Gene3D - 191 414 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0591 Dod-Chr4 8450684 8454393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0591 112 392 Miscellaneous Gene Families AT1G07710 29.210 2.15e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0591 - - gmx:100796359 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0591 04 8450684 8454393 Dod04g0591 04 8450684 8454393 ECH
Dod04g0591 04 8450684 8454393 Dod04g2007 04 43512665 43515965 PCT