Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1622 ATGTGGTGGCCCAGCACCCTCGTCCAGGTCTCTCTTTTCCGAGCTTTGCATGAGAAAGACGACCAGCGATTTTCACGGGCAAAGTTCTTCTTCATTGCACTAGTATGCAGCTTTGCGTGGTATGTGGTCCCTGGATACTTCTTCTCAACGCTGACAAGCATATCATGGATGTGCTGGATATTCCCCAAGTCAGTCACGGCTCAGCAGATAGGCTCAGGCATGAATGGCTTAGGACTTGGAGCCTTGACACTTGACTGGACTGCCGTGGCATCATTCTTGTTCAGCCCTCTCATCTCACCCTTCTTTGCCATTGTCAACGTTTTTGTGGGCTATGCATTGATTGTCTATGCTGTAATTCCTATTGCATACTGGGGCTTCAATATGTACAGTGCAAACGTGTTCCCCATTTTCTCCTCAGACTTGTTCACAGCCCATGGCGACCAATACAACATAACTGCTATAGTCAATGACAAGTTTGAGCTTGATCTTGCCAAGTATCACGACCAAGGTCGAATTCATCTAAGTGTGTTCTTCTCTCTTACTTATGGATTTGGATTTGCCACTATAGCATCCACCCTTACTCATGTCCTTTGCTTCTATGGAAGGGAGATCATGCAGCGGTATCGTGCTTCTTCCAAGGGCAAAGAAGATATCCACACTAAACTGATGAAAAGATACAAAGACATACCTTCTTGGTGGTTTTATGTGTTGCTGGTCGTGACGTTTGTGGTTTCTCTCTTTCTGTGTCTCTTCCTAAATGACCAGATTCAGATGCCGTGGTGGGGACTTGTCTTTGCTTCGGCCTTGGCCTTTATATTTACTCTCCCAATCAGCATCATAACTGCCACCACAAACCAGACACCCGGGTTGAATATCATTACCGAGTATATCTTTGGAATCATTTACCCCGGAAGACCAATAGCCAATGTGTGCTTCAAAACCTACGGTTACATAAGCATGGCTCAGGCTGTTTCCTTCCTTAGTGATTTCAAGCTTGGGCACTACATGAAAATCTCTCCAAGATCAATGTTCTTAGTTCAGTTCATTGGCACAATTCTTGCTGGAACCATCAACATTGGTGTAGCATGGTGGTTGCTGAACTCTATAGAGCACATATGTCATCCTGGACTCCTTCCAGATGGCAGTCCCTGGACATGTCCTAGTGACCGTGTCTTCTTTGATGCATCAGTGATTTGGGGTCTAGTTGGACCTAAGAGGATCTTTGGTTCCAAAGGAGACTACCGTGCACTGAATTGGTTCTTCCTTGGAGGTGCAATAGGCCCCATAATAGTTTGGCTACTGCACAAGGCTTTTCCCAAGAAGTCATGGATTCCCTTGATTAACCTTCCAGTCCTACTTGGAGCAACCGGGATGATGCCACCAGCAACACCATTGAACTACAATGCCTGGATTTTTATTGGAACAATCTTCAACTTCTTTGTGTTCCGTTACAGGAAGCAGTGGTGGCAGAGATACAACTATGTTCTGTCAGCAGCACTTGATGCTGGGGTTGCCTTTATGGCTGTGCTGCTTTACTTTGCTCTAGGCCTGGAAAACAGGACTTTTACTTGGTGGGGAACTGATGGTGAGCACTGTCCACTGGCAACTTGCCCAACAGCTAAGGGCATAGTGGTTGATGGTTGTCCTGTATACTGA 1656 0.4601 MWWPSTLVQVSLFRALHEKDDQRFSRAKFFFIALVCSFAWYVVPGYFFSTLTSISWMCWIFPKSVTAQQIGSGMNGLGLGALTLDWTAVASFLFSPLISPFFAIVNVFVGYALIVYAVIPIAYWGFNMYSANVFPIFSSDLFTAHGDQYNITAIVNDKFELDLAKYHDQGRIHLSVFFSLTYGFGFATIASTLTHVLCFYGREIMQRYRASSKGKEDIHTKLMKRYKDIPSWWFYVLLVVTFVVSLFLCLFLNDQIQMPWWGLVFASALAFIFTLPISIITATTNQTPGLNIITEYIFGIIYPGRPIANVCFKTYGYISMAQAVSFLSDFKLGHYMKISPRSMFLVQFIGTILAGTINIGVAWWLLNSIEHICHPGLLPDGSPWTCPSDRVFFDASVIWGLVGPKRIFGSKGDYRALNWFFLGGAIGPIIVWLLHKAFPKKSWIPLINLPVLLGATGMMPPATPLNYNAWIFIGTIFNFFVFRYRKQWWQRYNYVLSAALDAGVAFMAVLLYFALGLENRTFTWWGTDGEHCPLATCPTAKGIVVDGCPVY* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1622 551 PANTHER OLIGOPEPTIDE TRANSPORTER 4 1 550 - -
Dod04g1622 551 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 1 517 IPR004813 GO:0035673
Dod04g1622 551 Pfam OPT oligopeptide transporter protein 1 514 IPR004813 GO:0035673
Dod04g1622 551 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 1 522 IPR004648 GO:0055085
Dod04g1622 551 PANTHER ISP4 LIKE PROTEIN 1 550 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1622 Dod-Chr4 38293486 38299461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1622 1 550 Organic Solute Cotransporters AT5G64410 80.000 0.0 942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1622 - - gmx:100819886 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0248 03 2623124 2629382 Dod04g1622 04 38293486 38299461 PCT