Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0248 ATGAAGGAGCACGTGCTCATCACCATATTCGCGAATGCTGGGAGCGCCTTCGGATCCGGGTCTCCCTACGCGGTGGGTATTGTGAACATAATTAAGGCTTTCTACGGACGCAGCATCTCCTTCGTTGCTTCTTGGCTTCTCATCATTACAACTCAAGTGCTAGGATATGGGTGGGCTGGGCTATTGAGGAAGTATGTGGTGGAACCAGCTCATATGTGGTGGCCCAGCACCCTCGTCCAGGTCTCGCTTTTCCGAGCTTTGCATGAGAAAGATGACCACCGACTTTCACGGGCAAAGTTCTTCTTCATTGCACTAGTGTGCAGTTTTTCGTGGTATGCGGTCCCTGGATACTTGTTCACAACGCTCACGAACATATCATGGGTGTGTTGGGTATTCTCCAAGTCAGTGACAGCTCAGCAGATAGGGTCAGGCATGAAAGGACTTGGGCTTGGAGCACTCACACTTGACTGGACTGCAGTGGCATCATTCTTGTTCAGCCCTCTCATCTCACCATTCTTTGCCATTGTCAATGTCTTTGTGGGCTATGCATTGATAGTCTATGTGGTGATTCCTATTGCTTATTGGGGCCTAAATGTGTACAATGCAAATAGGTTCCCCATTTTCTCCTCCCACTTGTTCACAGCCCAAGGCCAAGCATACAACATATCTGCTATTGTCAATGACAAGTTTGAGCTCGATGTTGCAAAGTATCAAGAGCAAGGAAGGATTAACCTTAGTGTGTTTTTTGCTCTCACTTACGGCTTTGGATTTGCCACCATAGCATCCACCCTTACACATGTTGCTTGCTTCTATGGAAGGGAGATTATGCAGCGCTATCGTGCTTCTTCGAAGGGGAAAGAAGACATCCACACAAAATTGATGAAAATATACAAAGACATACCTTCTTGGTGGTTTCATTTGTTACTTGGTGTGACACTTGGGGTTTCTCTCATACTATGCATCGTTCTAAATGACCAAGTTCAGATGCCCTGGTGGGGTCTTCTGTTTGCTGGATTTCTAGCCTTTTCATTCACCCTCCCAATTAGCATCATTACTGCCACCACAAACCAGACACCAGGATTGAATATCATCACCGAGTATGTCTTTGGTCTCATTTACCCTGGAAGACCAATAGCGAATGTTTGCTTCAAAACCTATGGTTACATTAGCATGGCTCAGGCTGTCTCCTTCCTCAGTGATTTCAAGCTTGGTCACTACATGAAAATCCCTCCAAGATCAATGTTCTTAGTTCAGTTCATAGGTACAATTCTTGCTGGAACTATCAACATTGGGGTAGCATGGTGGTTGCTGAACTCTATCAACAACATATGTCATGATGAGCTTCTTCCTCAAGGCAGTCCATGGACATGCCCGGGTGATCGAGTATTCTTCGATGCATCAGTTATTTGGGGTCTGGTTGGACCAAAGAGGATCTTTGGCTCTAAAGGAAACTATAGTGCAATGAATTGGTTCTTCCTTGGTGGTGCAATCGGGCCTGTAATTGTTTGGCTATTGCACAAGGCATTCCCCAAACAGTCATGGATTCCACTAATCAACCTTCCTGTCCTCCTTGGAGCAACTGGAATGATGCCACCAGCAACAACGTTGAACTACAACGCCTGGATTTTCTTCGGAACAATCTTCAACTTCTTTGTGTTCCGTTACAGAAAGCAATGGTGGCAGAGATACAACTATGTTCTGTCGGCAGCACTTGATGCCGGGGTTGCCTTTATGGCTGTTCTGCTGTATTTCTCACTGGGCCTGGAGAACAAGAGTGTTGATTGGTGGGGAAATGATGGTGAACATTGTCCACTGGCATCATGCCCAACTGCCAAGGGCATTGAGGTTGATGGTTGCCCAGCACATTAG 1869 0.4623 MKEHVLITIFANAGSAFGSGSPYAVGIVNIIKAFYGRSISFVASWLLIITTQVLGYGWAGLLRKYVVEPAHMWWPSTLVQVSLFRALHEKDDHRLSRAKFFFIALVCSFSWYAVPGYLFTTLTNISWVCWVFSKSVTAQQIGSGMKGLGLGALTLDWTAVASFLFSPLISPFFAIVNVFVGYALIVYVVIPIAYWGLNVYNANRFPIFSSHLFTAQGQAYNISAIVNDKFELDVAKYQEQGRINLSVFFALTYGFGFATIASTLTHVACFYGREIMQRYRASSKGKEDIHTKLMKIYKDIPSWWFHLLLGVTLGVSLILCIVLNDQVQMPWWGLLFAGFLAFSFTLPISIITATTNQTPGLNIITEYVFGLIYPGRPIANVCFKTYGYISMAQAVSFLSDFKLGHYMKIPPRSMFLVQFIGTILAGTINIGVAWWLLNSINNICHDELLPQGSPWTCPGDRVFFDASVIWGLVGPKRIFGSKGNYSAMNWFFLGGAIGPVIVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATTLNYNAWIFFGTIFNFFVFRYRKQWWQRYNYVLSAALDAGVAFMAVLLYFSLGLENKSVDWWGNDGEHCPLASCPTAKGIEVDGCPAH* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0248 622 PANTHER OLIGOPEPTIDE TRANSPORTER 4 1 621 - -
Dod03g0248 622 Pfam OPT oligopeptide transporter protein 2 585 IPR004813 GO:0035673
Dod03g0248 622 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 1 588 IPR004813 GO:0035673
Dod03g0248 622 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 2 590 IPR004648 GO:0055085
Dod03g0248 622 PANTHER ISP4 LIKE PROTEIN 1 621 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0248 Dod-Chr3 2623124 2629382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0248 1 620 Organic Solute Cotransporters AT5G64410 83.065 0.0 1087
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0248 - - ahf:112714781 1177.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0248 03 2623124 2629382 Dod03g0248 03 2623124 2629382 ECH
Dod03g0248 03 2623124 2629382 Dod04g1622 04 38293486 38299461 PCT