Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1599 ATGAACTCATATGCCCGTGCAGAGGTTGGTGTTGGTCCACTCTCATGGAACGACACACTCGCATCCTATGCTCAGAACTATGCAAACTCGAGGGTCCAAGACTGCGATATGGTGCATTCTAGGGGACCTTATGGGGAGAACCTGGCGGCGGGTTCCGGCGAGATGCAGGGTGGGGACGCCGTGAATTTATGGCTGACGGAGAGGCCAAACTATGACTACAACTCCAACTCGTGTGTGAATGATGAGTGCTTGCACTATACTCAGATCGTTTGGCGTGACACCGTTCATGTTGGGTGTGCTAGGGCCAAGTGCAACAATGGCTGGACGTTTGCCATTTGCAGCTATGCCCCACCAGGCAACGTTCTAGGCCAGCGACCTTATTGA 384 0.5339 MNSYARAEVGVGPLSWNDTLASYAQNYANSRVQDCDMVHSRGPYGENLAAGSGEMQGGDAVNLWLTERPNYDYNSNSCVNDECLHYTQIVWRDTVHVGCARAKCNNGWTFAICSYAPPGNVLGQRPY* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1599 127 SUPERFAMILY PR-1-like 4 127 IPR035940 -
Dod04g1599 127 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 4 127 IPR001283 -
Dod04g1599 127 PANTHER - 4 127 - -
Dod04g1599 127 SMART SCP_3 4 123 IPR014044 -
Dod04g1599 127 PRINTS Allergen V5/Tpx-1 family signature 60 73 IPR001283 -
Dod04g1599 127 PRINTS Allergen V5/Tpx-1 family signature 110 123 IPR001283 -
Dod04g1599 127 PRINTS Allergen V5/Tpx-1 family signature 83 99 IPR001283 -
Dod04g1599 127 PRINTS Allergen V5/Tpx-1 family signature 14 32 IPR001283 -
Dod04g1599 127 PRINTS Venom allergen 5 signature 82 101 IPR002413 -
Dod04g1599 127 PRINTS Venom allergen 5 signature 14 32 IPR002413 -
Dod04g1599 127 Gene3D CAP 1 127 IPR035940 -
Dod04g1599 127 CDD CAP_PR-1 5 127 - -
Dod04g1599 127 Pfam Cysteine-rich secretory protein family 5 115 IPR014044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1599 Dod-Chr4 38083672 38085752 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1599 K13449 - gmx:100527778 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1599 04 38083672 38085752 Dod03g0279 03 2984219 2984710 PCT