Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0279 ATGAGTACTGTGCAAAAATTCCCATCAATGCTTCCTTTCTTGGCTGTCCTAGCCATATTATCACAAGTCTCTTATGCCCAAAACTCGCCCCAGGACTACCTCAACGCACACAACGCAGCACGCTCCCAAGTTGGGGTTGGTCCTATGACATGGGATGCAACTGTTGCCACTTATGCACAGAACTACGTGAACAAACTCAGGGGAACCTGTCGGATGGTGCACTCTGGGGGTCCCTATGGTGAGAACCTTGCGTGGAGCAGTGCAGATCTTACAGGCACTGCTGCCGTCAAATTGTGGGTGGATGAGAAGCCATACTATGACTACAACTCCAACTCGTGCGTTGGTGGTAAAGAGTGCCGCCACTATACTCAGGTGGTTTGGCGCAAATCGGTTCGTCTTGGATGTGCCAAAGTAAGATGTGACAATGGAGGCACAATAATCAGCTGCAACTATGATCCCCCAGGCAACTATGCTGGCCAAAGGCCTTACTAG 492 0.5041 MSTVQKFPSMLPFLAVLAILSQVSYAQNSPQDYLNAHNAARSQVGVGPMTWDATVATYAQNYVNKLRGTCRMVHSGGPYGENLAWSSADLTGTAAVKLWVDEKPYYDYNSNSCVGGKECRHYTQVVWRKSVRLGCAKVRCDNGGTIISCNYDPPGNYAGQRPY* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0279 163 ProSitePatterns CRISP family signature 1. 120 130 IPR018244 GO:0005576
Dod03g0279 163 ProSitePatterns CRISP family signature 2. 146 157 IPR018244 GO:0005576
Dod03g0279 163 PANTHER PATHOGENESIS-RELATED PROTEIN 1 20 163 - -
Dod03g0279 163 CDD CAP_PR-1 30 163 - -
Dod03g0279 163 Gene3D CAP 27 163 IPR035940 -
Dod03g0279 163 Pfam Cysteine-rich secretory protein family 34 151 IPR014044 -
Dod03g0279 163 PRINTS Allergen V5/Tpx-1 family signature 49 67 IPR001283 -
Dod03g0279 163 PRINTS Allergen V5/Tpx-1 family signature 95 108 IPR001283 -
Dod03g0279 163 PRINTS Allergen V5/Tpx-1 family signature 146 159 IPR001283 -
Dod03g0279 163 PRINTS Allergen V5/Tpx-1 family signature 119 135 IPR001283 -
Dod03g0279 163 SMART SCP_3 28 159 IPR014044 -
Dod03g0279 163 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 20 163 IPR001283 -
Dod03g0279 163 SUPERFAMILY PR-1-like 22 163 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0279 Dod-Chr3 2984219 2984710 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0279 K13449 - qsu:112036655 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0279 03 2984219 2984710 Dod03g0279 03 2984219 2984710 ECH
Dod04g1599 04 38083672 38085752 Dod03g0279 03 2984219 2984710 PCT