Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0320 ATGGCTTCAATCGCGCTTCTTTCTCCAGCAACTCTCGTATCCATAACTGGTAGGGTGAAGCAGACGAGGGAACTCTATACTGCAAACTCAATTGGCGCGAGATATAGAGAGAGCTTGGTGCCACCGCTACTTCCTCCAAAGTGGAGGGTCCAAAGGCTTCAATTGTTTGGTGGTTCCAGTTTGTCAACAAATCCAGTTGGAGATACAAGTGCCGTGGTGGTGAAGGCCTCTGAAGGAGGAGCCATCTCTCTCGGCACTCATGCTTGGCCGCTTCCAAAGGGCTCAGAAAAGGACCAAATAGAAGAAGACCCAGTTGCTCAAAAGATGAAGGGTACGAGCCGTTTCTTCACGGTGGGTCTGGTAGCAGCATGGTACTCCTCCAACATTGGTGTGCTCCTTCTGAACAAGTACCTTCTAAGCAACTACGGCTTCAAGTACCCGATCTTCCTCACCATGTGCCACATGACAGCGTGTTCTTTGTTCAGCTACGTTGCCATAGCGTGGATGAAGGTGGTCCCTTTGCAGACCATTCGATCCAGGGTCCAGTTCCTCAAGATCTCTGCTCTCAGCCTCGTTTTCTGCGTCTCCGTTGTGTTTGGGAACATATCGCTCAGGTACTTGCCTGTGTCGTTTAACCAGGCAATTGGTGCAACGACGCCCTTCTTCACTGCCGTTTTTGCTTACCTCATGACGTTCAAGAGGGAGGCTTGGCTCACTTATCTCACCCTTGTTCCTGTTGTCACTGGGGTCATCATTGCCAGCGGGGGTGAACCTAGTTTTCATTTATTTGGATTCATAATATGTGTTGCGGCTACAGCAGCAAGGGCCCTGAAATCTGTGCTACAAGGAATTTTGCTTTCTTCTGAAGGAGAGAAGCTGAATTCCATGAACCTTCTCCTTTACATGGCTCCAATGGCTGTGGTTTTCCTTCTTCCTGCCACACTTATTATGGAAGAAAATGTGGTTGGCGTCACGTTGGCTCTTGCCAGAGATGATTCTAAGATCATCTGGTATCTGCTATTCAATTCAGCACTTGCATATTTTGTCAACCTGACCAATTTTTTGGTTACAAAACACACAAGTGCTCTGACCCTTCAGGTACTGGGGAATGCTAAAGGAGCTGTAGCGGTGGTAGTATCAATTCTAATATTCAGAAACCCAGTGTCAGTCACTGGAATGCTGGGCTACACGCTCACGGTCTTTGGAGTTATACTTTACAGTGAAGCCAAAAAGCGAAGCAAGTGA 1245 0.4795 MASIALLSPATLVSITGRVKQTRELYTANSIGARYRESLVPPLLPPKWRVQRLQLFGGSSLSTNPVGDTSAVVVKASEGGAISLGTHAWPLPKGSEKDQIEEDPVAQKMKGTSRFFTVGLVAAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYVAIAWMKVVPLQTIRSRVQFLKISALSLVFCVSVVFGNISLRYLPVSFNQAIGATTPFFTAVFAYLMTFKREAWLTYLTLVPVVTGVIIASGGEPSFHLFGFIICVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGVTLALARDDSKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYTLTVFGVILYSEAKKRSK* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0320 414 Pfam Triose-phosphate Transporter family 120 407 IPR004853 -
Dod04g0320 414 PANTHER - 46 413 - -
Dod04g0320 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 305 408 - -
Dod04g0320 414 PANTHER SOLUTE CARRIER FAMILY 35 46 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0320 Dod-Chr4 4193114 4201334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0320 107 414 Organic Solute Cotransporters AT3G11320 90.909 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0320 - - gmx:100785614 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0732 08 8736789 8741030 Dod04g0320 04 4193114 4201334 ECH
Dod01g1187 01 24255423 24258740 Dod04g0320 04 4193114 4201334 ECH
Dod05g0587 05 8550029 8552952 Dod04g0320 04 4193114 4201334 ECH
Dod04g0320 04 4193114 4201334 Dod04g0320 04 4193114 4201334 ECH
Dod04g0320 04 4193114 4201334 Dod08g0732 08 8736789 8741030 PCT