Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1187 ATGCAGGAACCTTGTATCAAGACCCAGATCATGGTGATTCCATGGTCAACCATTGGGGTGGTGATTGCTTGGTATAGTTCAAACATTGGTATTCTCCTTCTGAACAAGTACTTGCTCAGCAATTATGGGTTCAAGTACCCAGTTTTCCTCACCATGTGTCACATGATGGTGTGTTCTGTGCTCAGCTTCTTTGCCATTCACTTGATGGAAGTGGTCCCTTTTCAGAGCATACAGTCCAAGAAACAGTTTGCCAAGATTTGCGGCCTTAGCCTCGTTTTCTGTTTCTCTGTTGTGTGTGGAAACATATCGCTTAACTACATTCCGGTGTCGTTTAACCAGGCAATTGGTGCCACCACCCCTTTCTTCACCGCAGCTTTTGCCTATGTGATGAGCAGGAAAAGAGAGGCTTGGGTTACGTATTGCACACTGTTGCCTGTTGTTGGAGGGGTCGTCATAGCTACTGAGGGTGAACGAAGTTTCCATTTGTTTGGCTTTTTGATCTGTGTGTCATCAACTGCTGCGAGAGCCTTTAAATCGGTGCTTCAAGCTATTTTGTTGTCCTCAGAGGGAGAAATGCTGAATTCTATGAACCTTCTACTTTATATGGCACCAATAGCAATGCTGGTCTTACTTCCTGCAGCATTACTGATGGAAGAGAATGTGATTCAGATCACAATGAATCTTGCAAGAAAGGATGTCAGAATTATCTGGTATCTGCTCTTCAGTTCCTCCCTTGCATATTTTGTGAACTTGACCAATTTTTTGGTGACAAAACATACAAGTGCTCTGACGCTTCAGGTTTTAGGAAATGCAAAGGGGGCATTTGCAGTGGTGGTCTCAATTTTGATATTCAAAAATCCCATTTCAGTTGTAGGAATGCTGGGCTATGCACTCACCGTCATTGGAGTTATTCTGTACAGTGAAACCAAGAAGAGGTATACTTGTTGA 948 0.4335 MQEPCIKTQIMVIPWSTIGVVIAWYSSNIGILLLNKYLLSNYGFKYPVFLTMCHMMVCSVLSFFAIHLMEVVPFQSIQSKKQFAKICGLSLVFCFSVVCGNISLNYIPVSFNQAIGATTPFFTAAFAYVMSRKREAWVTYCTLLPVVGGVVIATEGERSFHLFGFLICVSSTAARAFKSVLQAILLSSEGEMLNSMNLLLYMAPIAMLVLLPAALLMEENVIQITMNLARKDVRIIWYLLFSSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAFAVVVSILIFKNPISVVGMLGYALTVIGVILYSETKKRYTC* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1187 315 SUPERFAMILY Multidrug resistance efflux transporter EmrE 204 307 - -
Dod01g1187 315 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 9 314 - -
Dod01g1187 315 PANTHER SOLUTE CARRIER FAMILY 35 9 314 - -
Dod01g1187 315 Pfam Triose-phosphate Transporter family 20 307 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1187 Dod-Chr1 24255423 24258740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1187 17 312 Organic Solute Cotransporters AT5G05820 76.689 3.81e-167 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1187 - - gmx:100799632 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1187 01 24255423 24258740 Dod08g0732 08 8736789 8741030 ECH
Dod01g1187 01 24255423 24258740 Dod04g0320 04 4193114 4201334 ECH
Dod01g1187 01 24255423 24258740 Dod01g1187 01 24255423 24258740 ECH
Dod01g1187 01 24255423 24258740 Dod05g0587 05 8550029 8552952 ECH