Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3220 ATGCCTGAGCCTCAAGGCCAAGCAACACCTCAAACCCCAAAGGAGTTCGATCATCAAAAGAAGCCCAAAAGGAACATGTATGCTTTAGCTTGTGCTATATTGGCTTCCATGACTTCCATCCTCCTTGGTTACGATCTTGGTGTGATGAGTGGAGCAGCGATGTATATAAAGAGAGATCTGAAAGTGACGGATGTGGAAATCGAAATCCTAGCTGGTATCATAAACCTGTATTCTCCCATAGGTTCATACATAGCAGGGAGAACCTCTGACTGGATTGGTCGCCGTTACACCATTGTGCTGGCCGCAGTCATTTTCTTTGCCGGGGCTATTCTTATGGGATTCTCTCCCAACTATGCCTTCCTCATGTTCGGCCGCTTTGTCGCTGGCATTGGTATTGGCTTTGCTTTCCTCATTTCCTCATTGCACCTGTTTACGTTTCCGAAATCTCCCCAACTTCCTCTCGTGGCTTCCTCACTTCCTTGCCTGAGCACAAATAAGAGGGAGCAACAACTAAGATCTAACATTGGGAAAAGAGGGGCGCAGGGGTTGAGGGAGATGGTCTCCCGACGACGCGACGCAAGCTTATGGTCACTGATAAGTGGATATGATGTGTGTGGTGTGGTCTAG 627 0.4817 MPEPQGQATPQTPKEFDHQKKPKRNMYALACAILASMTSILLGYDLGVMSGAAMYIKRDLKVTDVEIEILAGIINLYSPIGSYIAGRTSDWIGRRYTIVLAAVIFFAGAILMGFSPNYAFLMFGRFVAGIGIGFAFLISSLHLFTFPKSPQLPLVASSLPCLSTNKREQQLRSNIGKRGAQGLREMVSRRRDASLWSLISGYDVCGVV* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3220 208 Pfam Sugar (and other) transporter 31 141 IPR005828 GO:0016021|GO:0022857|GO:0055085
Dod03g3220 208 ProSiteProfiles Major facilitator superfamily (MFS) profile. 31 208 IPR020846 GO:0022857
Dod03g3220 208 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 14 142 IPR045262 GO:0015144
Dod03g3220 208 MobiDBLite consensus disorder prediction 1 20 - -
Dod03g3220 208 ProSitePatterns Sugar transport proteins signature 1. 85 102 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod03g3220 208 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 14 142 - -
Dod03g3220 208 Gene3D MFS general substrate transporter like domains 14 150 IPR036259 -
Dod03g3220 208 PRINTS Sugar transporter signature 39 49 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g3220 208 PRINTS Sugar transporter signature 122 141 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g3220 208 SUPERFAMILY MFS general substrate transporter 15 143 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3220 Dod-Chr3 64799754 64801013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3220 2 142 Organic Solute Cotransporters AT3G18830 67.586 2.00e-61 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3220 - - adu:107476619 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3220 03 64799754 64801013 Dod03g3220 03 64799754 64801013 ECH
Dod03g3220 03 64799754 64801013 Dod02g0347 02 4758725 4761275 ECH