Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0347 ATGATGGAGGTTGTGATCGTTGCAGTTGCTGCTACACTTGGGAATCTACTGGTTGGATGGGATAGTTCAACGATTGCAGGGGGCACAACCTACATCAAGCAGGAATTCAACTTGGAAGCTGATCCTACACTTGAAGGGCTGATTGTCTCCATGTCCTTTCTAACCGGCACTGTTGTGACTATATTTTCTGGGACAGTCTCTGATTTTCTTGGAAGACGCCCTATGTTGATAGCATCATCCATTATGTTTTTCTGTAGCGGTTTGGTAGCGTTGTGGGCGCCTAGTGTTGTTGTTGTTCTCTTGTCAAGGGTATTAGATGGGGTTGCAATTGGTCTTGCCAGCACTTTTACTCCTCTCTACATATCTGAGATAGCCCCATCTGATATCAGGGGCCAATTGAACACCTTCACACAATTTGCATCTTCTGCCGGAATGTTTCTGGCTTACATCTTGGTGTTCTCGATGTCCCTCATGTACTCACCGAGTTGGAGAGCCATGCTTGGTGTTATTTTCATTCCTTCAATTGCTTATTTTTCGCTGGCTGTGTTCTACCTGCCTGAATCTCCTCGGTGGCTTGTAAGTAAAGGTAGGATACGTGAGGCTGAAAAAGTGCTGCGAAGACTTCGCGGGGCCGAAGATATTTCAGGCGAGTTGGCTTTGCTGGCTGAGGGTCTTAGCCCTGGGGGCGAAGCGACTTCATTAGAAGAGTACATAGTTGCCCCGGCCAGCGAGGTTCTTGTTAACCAGGAAGCAGCCAAAGATTATATAAAGCTGTATGGACCCAATGAGGGGGTGTCATTGGTTGCACAACCAGTGAATGGACAGGGTAGCTTGATATCGCGCAGTATGTTGTCCCAACAAGGAAGCTTTGCATCTCAAGCTGCTGCTGGTCTTAAGGATCCTATTGTCAATCTCTTTGGAAGTTTGCATGACAATTCCCTCCCTGAGAATGTAGGTTCGCGCAGTATGCTAATTAATAATCCAAACAGTATCTTTGGAGATCCAGAGTCCAGCCCTTGTGGTACCAGTGACAACCTGCATGCTCCACTGCTTTCATTTCAAGGTGGTGCTGGGGAGAGATCCAAGGACACGTTAGGTATGAGGAGCGCTAGCAGCCTGAGAAGTAACAGCGGTTTGGTTCATGGGAATGCTGTGGAAACACCTAGAAATGCAAACATTGGTGGAGGTTGGCAATTGGTTTATAAAACAGCTGATGGTGCTGTGGGTGGAAAAAGAGAAGGACTCCAAAGGGTTTATCTGCACGCAGATCCTGCTGCAGTGCCTCAATCTCAGCATGTTTCGTTTGTTTCAACTTCTGGTTATGACATACCTGTGGATGGGGGGGAAACTTACCAGGCTGCTGCTTTAGTCAGCCAGTCAGTTCTAGGTACTCATGATGTGTTGAGGGTGCCAGAAGTTGCGATAAAAGGTCCAAATTGGAAAGGTGTTCTAGAACCAGGAGTAAAGCGAGCATTGATTGTTGGAATAGGACTTCAGATTCTTCAACAGGCTGCTGGCATAAATGGATTTCTATACTTATGCCCCCCAGATTCTTGA 1557 0.4689 MMEVVIVAVAATLGNLLVGWDSSTIAGGTTYIKQEFNLEADPTLEGLIVSMSFLTGTVVTIFSGTVSDFLGRRPMLIASSIMFFCSGLVALWAPSVVVVLLSRVLDGVAIGLASTFTPLYISEIAPSDIRGQLNTFTQFASSAGMFLAYILVFSMSLMYSPSWRAMLGVIFIPSIAYFSLAVFYLPESPRWLVSKGRIREAEKVLRRLRGAEDISGELALLAEGLSPGGEATSLEEYIVAPASEVLVNQEAAKDYIKLYGPNEGVSLVAQPVNGQGSLISRSMLSQQGSFASQAAAGLKDPIVNLFGSLHDNSLPENVGSRSMLINNPNSIFGDPESSPCGTSDNLHAPLLSFQGGAGERSKDTLGMRSASSLRSNSGLVHGNAVETPRNANIGGGWQLVYKTADGAVGGKREGLQRVYLHADPAAVPQSQHVSFVSTSGYDIPVDGGETYQAAALVSQSVLGTHDVLRVPEVAIKGPNWKGVLEPGVKRALIVGIGLQILQQAAGINGFLYLCPPDS* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0347 518 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod02g0347 518 PRINTS Sugar transporter signature 100 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod02g0347 518 PRINTS Sugar transporter signature 502 512 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod02g0347 518 Gene3D MFS general substrate transporter like domains 1 238 IPR036259 -
Dod02g0347 518 Pfam Sugar (and other) transporter 7 220 IPR005828 GO:0016021|GO:0022857|GO:0055085
Dod02g0347 518 ProSitePatterns Sugar transport proteins signature 1. 63 80 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod02g0347 518 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 1 515 - -
Dod02g0347 518 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 518 IPR020846 GO:0022857
Dod02g0347 518 ProSitePatterns Sugar transport proteins signature 2. 105 130 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod02g0347 518 PANTHER - 1 515 - -
Dod02g0347 518 SUPERFAMILY MFS general substrate transporter 7 212 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0347 Dod-Chr2 4758725 4761275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0347 14 515 Organic Solute Cotransporters AT4G35300 48.045 1.67e-139 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0347 - - gmx:100789093 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0347 02 4758725 4761275 Dod02g0347 02 4758725 4761275 ECH
Dod03g3220 03 64799754 64801013 Dod02g0347 02 4758725 4761275 ECH