Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3036 ATGGACCCCCATGAGCTCAAGCGCGTGTTCCAAATGTTTGATCGAAACGGCGATGGCCGAATCTCAAAAAAGGAGCTAAACGACTCCTTGGAGAAGCTCGGGATCTTCATCCCGGACACGGAGTTAACTCAAATGATAGAGAAGATCGACGTGAACGGCGACGGTTGGGTGGACATGGAGGAGTTCGGTGACCTATACCAGTCGATAATGGAGGATCAGGAGGATCAAGGGAGGGACGAGGAAGAAGACATGAGGGAAGCATTCAATGTTTTTGATCAGAATGGAGATGGCTTCATAACGGTTGAGGAGCTTAGGGCTGTGCTAGCTTCTCTAGGGTTGAAGCAAGGGAGGACGGTGGAGGAGTGCAAGAAAATGATCAGGAAGGTCGATGTTGATGGGGATGGCATGGTTAATTACAAGGAGTTCAAGCAGATGATGAAAGGAGGTGGATTCAGTGCTCTTGGTTGA 468 0.4936 MDPHELKRVFQMFDRNGDGRISKKELNDSLEKLGIFIPDTELTQMIEKIDVNGDGWVDMEEFGDLYQSIMEDQEDQGRDEEEDMREAFNVFDQNGDGFITVEELRAVLASLGLKQGRTVEECKKMIRKVDVDGDGMVNYKEFKQMMKGGGFSALG* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3036 155 CDD EFh 83 147 IPR002048 GO:0005509
Dod03g3036 155 ProSitePatterns EF-hand calcium-binding domain. 50 62 IPR018247 -
Dod03g3036 155 ProSiteProfiles EF-hand calcium-binding domain profile. 79 114 IPR002048 GO:0005509
Dod03g3036 155 Pfam EF-hand domain pair 81 147 IPR002048 GO:0005509
Dod03g3036 155 Pfam EF-hand domain pair 5 67 IPR002048 GO:0005509
Dod03g3036 155 SMART efh_1 5 33 IPR002048 GO:0005509
Dod03g3036 155 SMART efh_1 121 149 IPR002048 GO:0005509
Dod03g3036 155 SMART efh_1 83 111 IPR002048 GO:0005509
Dod03g3036 155 SMART efh_1 41 69 IPR002048 GO:0005509
Dod03g3036 155 ProSitePatterns EF-hand calcium-binding domain. 92 104 IPR018247 -
Dod03g3036 155 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 1 154 - -
Dod03g3036 155 ProSitePatterns EF-hand calcium-binding domain. 14 26 IPR018247 -
Dod03g3036 155 SUPERFAMILY EF-hand 5 147 IPR011992 -
Dod03g3036 155 ProSiteProfiles EF-hand calcium-binding domain profile. 117 152 IPR002048 GO:0005509
Dod03g3036 155 ProSiteProfiles EF-hand calcium-binding domain profile. 1 36 IPR002048 GO:0005509
Dod03g3036 155 ProSiteProfiles EF-hand calcium-binding domain profile. 37 72 IPR002048 GO:0005509
Dod03g3036 155 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 1 154 - -
Dod03g3036 155 Gene3D - 2 67 - -
Dod03g3036 155 ProSitePatterns EF-hand calcium-binding domain. 130 142 IPR018247 -
Dod03g3036 155 Gene3D - 68 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3036 Dod-Chr3 63165514 63166211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3036 1 153 EF-hand Containing Proteins AT2G43290 72.549 2.71e-79 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3036 K13448 - zju:107422102 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1818 10 39673058 39673717 Dod03g3036 03 63165514 63166211 PCT