Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2925 ATGGGTCAGGGGCTGAGTTGCAGAGGGAGCCATGAGCATGGCCTGTTCCGTGCAGTGCAGCATGGGGACATTGAAACTGTGGCAACTCTGCTTCACACGCACCCTTCTCTCATGCACCACTCCACTGTCTATGATCGCCACTCCCCTCTTCATATTGCCGCTGCTAATGGCCAGATCCAGATTTTGTCTAGGCTTTTAGATGGATCTGTGAATCCAGATGTTTTGAATCGCCAAAAGCAGACTCCGCTTATGTTGGCAGCAATGCACGGGAAGATCGCCTGTGTGGAGAAGCTCCTTGAAGCCGGTGCTAATGTATTAATGTTTGATGCTCATTACGGAAGAACCTGCTTGCACTATGCCGCTTATTATGGCCATTCTTCTTGCCTTAAGGCAATTCTTTCTGCTGCTCAAACTAGTCCAGTGGCTGTTTCTTGGGGATTTGCTCGGTTTGTGAATATTAGAGATGGTAGGGGTGCAACACCATTGCACTTGGCGGCACGCCAAAGACGGGCTGAATGTGTACATATTCTATTGGACAGTGGAGCTCTTGTTTGTGCTTCAACTGGAAGATATGGTTGCCCCGGGAGCACTCCTTTACATTTGGCAGCTAGAGCTGGCTCTCTCGATTGCGTCCGAAAACTGTTGGCTTGGGGTGCAGACCGACTTCAACGCGATGTGTCTGGACGGATACCCTATCTAGTTGCTCTGAAACACAGGCATGGCGCATGTGCGGCATTGCTGAATCCAACATCTGCAGAGCCTCTAGTTTGGCCATCACCTTTGAAGGTCATCAGTGAGCTTAATCCAGAGGCCAAAGCATTACTAGAGCAGGCCTTGATGGATGCAAACAAGGAAAGGGAGAAAAACATATTGAAAGAGAGTGCTTACTCCCTTCCATCTCCGTCACACACTGGTGGAATAGATGACAATATCTCTGAGGTAAGCGAGACAGAATTGTGCTGCATCTGCTTTGAGCAGGTATGCACAATTGAAGTCCAGGACTGTGGCCACCAGATGTGTGCACAATGCACACTAGCACTCTGCTGCCACAAGAAGCCCAACCCTGCTACTGCTTGTCTTACCCCACCAGTTTGCCCATTCTGCCGGAGCACCATAGCCAGGCTAGCGGTTATCAAGATAGAAAGCCATGATGACATTGATCAAGATTGTGTTGATATCAATTGCTCCGTGCCAAGCAAGTCAAGGAAGTCCCGGAACTTAAACGAGGGCGGTAGCAGCAGCTTCAAGGGGTTATCCACCGTTGGATCTTTCGGAAAGATGGGTGGCCTTAGCTCCGGAAGGATTGCTGCCGAAAATGAGTGGGTTGATAACAAACAACAGTGA 1344 0.4955 MGQGLSCRGSHEHGLFRAVQHGDIETVATLLHTHPSLMHHSTVYDRHSPLHIAAANGQIQILSRLLDGSVNPDVLNRQKQTPLMLAAMHGKIACVEKLLEAGANVLMFDAHYGRTCLHYAAYYGHSSCLKAILSAAQTSPVAVSWGFARFVNIRDGRGATPLHLAARQRRAECVHILLDSGALVCASTGRYGCPGSTPLHLAARAGSLDCVRKLLAWGADRLQRDVSGRIPYLVALKHRHGACAALLNPTSAEPLVWPSPLKVISELNPEAKALLEQALMDANKEREKNILKESAYSLPSPSHTGGIDDNISEVSETELCCICFEQVCTIEVQDCGHQMCAQCTLALCCHKKPNPATACLTPPVCPFCRSTIARLAVIKIESHDDIDQDCVDINCSVPSKSRKSRNLNEGGSSSFKGLSTVGSFGKMGGLSSGRIAAENEWVDNKQQ* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2925 447 ProSiteProfiles Ankyrin repeat profile. 78 110 IPR002110 GO:0005515
Dod03g2925 447 PANTHER UBIQUITIN-PROTEIN LIGASE XBAT31, PUTATIVE-RELATED 1 444 - -
Dod03g2925 447 ProSiteProfiles Ankyrin repeat region circular profile. 78 105 - -
Dod03g2925 447 PANTHER HOMEOBOX PROTEIN WARIAI 1 444 - -
Dod03g2925 447 Pfam Ankyrin repeats (many copies) 194 235 IPR002110 GO:0005515
Dod03g2925 447 Pfam Ankyrin repeat 158 185 IPR002110 GO:0005515
Dod03g2925 447 Pfam Ankyrin repeat 112 134 IPR002110 GO:0005515
Dod03g2925 447 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 304 388 IPR013083 -
Dod03g2925 447 ProSiteProfiles Ankyrin repeat profile. 194 226 IPR002110 GO:0005515
Dod03g2925 447 MobiDBLite consensus disorder prediction 400 420 - -
Dod03g2925 447 SUPERFAMILY RING/U-box 314 373 - -
Dod03g2925 447 Pfam Ankyrin repeats (3 copies) 15 109 IPR002110 GO:0005515
Dod03g2925 447 ProSiteProfiles Ankyrin repeat profile. 45 77 IPR002110 GO:0005515
Dod03g2925 447 Gene3D - 8 143 IPR036770 -
Dod03g2925 447 ProSiteProfiles Ankyrin repeat region circular profile. 157 182 - -
Dod03g2925 447 SUPERFAMILY Ankyrin repeat 15 250 IPR036770 -
Dod03g2925 447 ProSiteProfiles Ankyrin repeat region circular profile. 194 220 - -
Dod03g2925 447 ProSiteProfiles Ankyrin repeat region circular profile. 45 77 - -
Dod03g2925 447 Gene3D - 144 250 IPR036770 -
Dod03g2925 447 ProSiteProfiles Zinc finger RING-type profile. 320 369 IPR001841 -
Dod03g2925 447 ProSiteProfiles Ankyrin repeat profile. 157 189 IPR002110 GO:0005515
Dod03g2925 447 SMART ANK_2a 78 107 IPR002110 GO:0005515
Dod03g2925 447 SMART ANK_2a 10 39 IPR002110 GO:0005515
Dod03g2925 447 SMART ANK_2a 157 186 IPR002110 GO:0005515
Dod03g2925 447 SMART ANK_2a 112 142 IPR002110 GO:0005515
Dod03g2925 447 SMART ANK_2a 194 223 IPR002110 GO:0005515
Dod03g2925 447 SMART ANK_2a 45 74 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2925 Dod-Chr3 61481331 61485256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2925 48 247 Miscellaneous Gene Families AT5G02620 30.769 1.52e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2925 - - gmx:100800611 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2925 03 61481331 61485256 Dod03g2925 03 61481331 61485256 ECH
Dod10g1716 10 38322222 38326185 Dod03g2925 03 61481331 61485256 PCT