Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2649 ATGGCATCCAGATCGTTCAAGGCTAGCAGATCATCTCTGTCAGTGACTTCTGATGCAATTGAAAGCCAGAAGCCTCCTTTACCTCCAACCGTCACATTTGCCAGAAGAACTTCTTCGGGTCGCTACATTAACTACTCCAGAGATGATCTTGACAGTGAGCTAGGCAGTAATGATTGCATGAATTATATGGTGCAGTTACCACCTACCCCTGATAACCAACCTATGGATCTATCCATCTCACTGAAAGTCGAGGAGCAATATGTGTCTAATTCACTATTCACGGGTGGATTCAACAGTGTTACAAGAGCACATCTAATGGACAAGGTGATAGAATCTGAAGCAAACCATCCACAGATGGCTGGTGCAAAAGGGTCCTCATGTGCAATACCTGGTTGTGATGCTAAGGTGATGAGTGATGAACGCGGTGAGGATATTCTTCCTTGTGAGTGTGATTTTAAGATATGTAGAGACTGCTACATTGATGCAGTGAAAACAGGAGGTGGAATATGCCCGGGATGCAAGGAGCCATACAAGAACACAGAACTGGATGAATTGGCTGTGGATAATGGAAGACCACTTTCACTTCCTCCACCAAGTGGGGTGTCTAAAATGGAGAGGAGATTGTCCTTGATGAAGTCAACAAAGTCAGCTCTAATGAGAAGCCAAACTGGAGATTTTGATCACAACAGGTGGCTCTTTGAAACAAGGGGTACCTATGGTTATGGCAATGCTATATGGCCAAAGGAAGGGAATTTTGGAAATGAAGATGATGAGAGTGTTGTTGAGCCAACTGAGTTGATGAGCAGACCCTGGAGGCCACTTACAAGGAAACTGAAGATACCTGCTGCTATTCTAAGTCCATATCGTCTCATTATTTTGATTCGAATGGTTGTCTTGGTACTGTTCCTGATATGGAGGGTCCAGAACCCAAATACTGATGCAATTTGGCTTTGGGGAATGTCCGTGGTTTGTGAGATATGGTTTGCTTTTTCTTGGCTTCTGGATCAATTGCCGAAGCTATGCCCAGTGAATCGTTCCACAGATCTTAATGTTCTCAAGGAGAAATTTGAAACACCGAATCCTAACAATCCTACTGGGAAGTCTGATCTTCCAGGCATAGATGTCTTTGTCTCTACTGCTGACCCTGAGAAAGAACCACCTCTTGTCACCGCAAACACAATCTTGTCTATTTTGGCTGCTGATTACCCAGTTGAGAAGCTTTCTTGCTATGTTTCTGATGATGGAGGTGCACTTCTAACTTTTGAGGCAATGGCTGAAGCTGCCAGCTTTGCTAATGTTTGGGTTCCCTTCTGCCGAAAGCATGATATAGAGCCAAGGAACCCTGAATCATATTTCAACTTGAAGAGAGATCCTTACAAGAACAAAGTAAAGCAAGATTTTGTCAAGGACCGTAGACGGGTGAAGCGTGAGTATGATGAGTTCAAGGTCAGGATCAATGGTCTGCCTGACTCAATCCGTCGCCGCTCTGATGCCTTTCATGCGAGGGAGGAAATCAAGGCCATGAAACTTCAGAGACAAAATAGAGAAGATGAACCTGTGGAGCCTGTAAAGATTCCAAAAGCAACATGGATGGCCGATGGAACTCATTGGCCAGGGACATGGTTGAATCCTGCATCTGAGCACTCTAAAGGTGACCATGCTGGTATAATTCAGGTGATGTTGAAACCTCCCAGTGATGAACCTCTCCTTGGAAGTGCTGATGATACAAAGCTCATTGACCTCACTGATATTGATATCCGTCTTCCCCTTCTTGTTTACGTTTCTAGAGAGAAACGTCCAGGCTATGATCACAACAAAAAAGCCGGAGCCATGAATGCCTTGGTTCGATCCTCAGCCATCATGTCCAATGGTCCTTTTATACTCAACCTCGACTGTGATCACTACATCTACAACTCAAAGGCAATGAGGGAAGGTATGTGCTTCATGATGGATCGCGGAGGTGACCGCCTTTGCTATGTCCAGTTCCCACAGAGGTTTGAGGGGATTGATCCCTCTGATAGATATGCAAATCACAATACTGTCTTCTTTGATGTCAACATGAGAGCCCTTGATGGACTTCAAGGGCCAGTTTATGTAGGAACTGGGTGTCTTTTCAGGAGGGTTGCCCTCTATGGTTTTGATCCACCCCGCTCCAAAGAGCACCACTCAGGTTGCTGCAGTTGCTGCTTTGGCAGCCGCAAGAGGAATTCATCGATGTCAAACAACCCTGAAGAAGGCCGGGCACTAAGGATGGGTGATTCTGATGATGAAGAAATGAACCTGTCATTGTTCCCCAAGAAGTTTGGAAACTCAACTCTCCTCATTGACTCAATCCCAGTGGCGGAGTTCCAAGGCAGGCCACTTGCTGATCACCCAGCAGTGAAGAATGGACGGGCACCGGGCGCCCTCACCGGCCCACGCGAGCTTCTAGATGCACCGACTGTGGCTGAGGCCATCAGTGTCATCTCCTGTTGGTATGAGGACAAGACTGAATGGGGGCAGCGTGTTGGATGGATCTATGGATCAGTCACTGAGGATGTTGTCACTGGTTATAGGATGCACAATAGGGGATGGAAGTCAGTTTACTGCGTGACAAAGCGCGACGCATTCCGCGGAACTGCTCCAATCAATCTCACTGATAGGCTGCATCAGGTTCTTAGATGGGCTACTGGCTCAGTAGAGATATTCTTCTCTAGGAACAATGCACTTCTAGCTAGCCCAAAGATGAAGTTTCTTCAACGCATGGCATACCTCAATGTCGGCATTTATCCATTCACTTCCATATTCCTCATTGTCTACTGCTTCCTTCCTGCACTCTCCCTCTTCTCAGGCCAGTTCATTGTCCAAACACTCAATGTCACATTCCTTGTTTACCTCTTGACCATCACAGTGACACTCTGCATGCTTGCTGTGCTTGAAATCAAGTGGTCTGGCATTGAGCTGGAAGAATGGTGGAGGAATGAGCAGTTTTGGTTGATTGGAGGGACCAGTGCACACCTTGCTGCTGTGCTTCAGGGCCTTCTCAAAGTCATTGCTGGCATTGAAATCTCATTCACATTGACATCAAAATCGGCTGGTGATGATGTGGATGATGAGTTTGCTGATCTCTACATTGTGAAATGGACATCCCTCATGGTACCACCAATCACAATCATGATGGTGAACTTGATAGCAATAGCAGTTGGGGTTAGCAGGACCATATACAGTGAGATACCACAGTGGAGCCGGTTACTAGGGGGTGTTTTCTTCAGCTTTTGGGTGTTGACACATCTCTACCCTTTTGCAAAAGGTTTGATGGGAAGAAGAGGGAGGACACCTACCATTGTTTTTGTATGGTCTGGCCTCATAGCAATCACAATATCATTACTTTGGGTGGCAATCAATCCCCCAGCTGGTTCCAACCAAATTGGTGGCTCATTCCAGTTCCCATGA 3432 0.4621 MASRSFKASRSSLSVTSDAIESQKPPLPPTVTFARRTSSGRYINYSRDDLDSELGSNDCMNYMVQLPPTPDNQPMDLSISLKVEEQYVSNSLFTGGFNSVTRAHLMDKVIESEANHPQMAGAKGSSCAIPGCDAKVMSDERGEDILPCECDFKICRDCYIDAVKTGGGICPGCKEPYKNTELDELAVDNGRPLSLPPPSGVSKMERRLSLMKSTKSALMRSQTGDFDHNRWLFETRGTYGYGNAIWPKEGNFGNEDDESVVEPTELMSRPWRPLTRKLKIPAAILSPYRLIILIRMVVLVLFLIWRVQNPNTDAIWLWGMSVVCEIWFAFSWLLDQLPKLCPVNRSTDLNVLKEKFETPNPNNPTGKSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANVWVPFCRKHDIEPRNPESYFNLKRDPYKNKVKQDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAFHAREEIKAMKLQRQNREDEPVEPVKIPKATWMADGTHWPGTWLNPASEHSKGDHAGIIQVMLKPPSDEPLLGSADDTKLIDLTDIDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRSSAIMSNGPFILNLDCDHYIYNSKAMREGMCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRVALYGFDPPRSKEHHSGCCSCCFGSRKRNSSMSNNPEEGRALRMGDSDDEEMNLSLFPKKFGNSTLLIDSIPVAEFQGRPLADHPAVKNGRAPGALTGPRELLDAPTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPKMKFLQRMAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLTITVTLCMLAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDVDDEFADLYIVKWTSLMVPPITIMMVNLIAIAVGVSRTIYSEIPQWSRLLGGVFFSFWVLTHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGSNQIGGSFQFP* 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2649 1143 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 34 1141 - -
Dod03g2649 1143 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 34 1141 - -
Dod03g2649 1143 Pfam RING/Ubox like zinc-binding domain 129 178 - -
Dod03g2649 1143 Pfam Cellulose synthase 373 1133 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dod03g2649 1143 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 191 IPR013083 -
Dod03g2649 1143 MobiDBLite consensus disorder prediction 1 33 - -
Dod03g2649 1143 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 580 714 IPR029044 -
Dod03g2649 1143 SUPERFAMILY RING/U-box 112 181 - -
Dod03g2649 1143 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2649 Dod-Chr3 57996765 58000927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2649 1 1143 Glycosyltransferase AT3G03050 84.028 0.0 2024
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2649 K20924 - gmx:100786644 2172.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2649 03 57996765 58000927 Dod02g1257 02 15248585 15254069 ECH
Dod03g2649 03 57996765 58000927 Dod03g2649 03 57996765 58000927 ECH